Zingiber officinale (ginger): 122025091
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Entry
122025091 CDS
T08725
Name
(RefSeq) cysteine protease ATG4B-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
zof04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122025091
04136 Autophagy - other
122025091
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122025091
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122025091
03029 Mitochondrial biogenesis [BR:
zof03029
]
122025091
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122025091
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122025091
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122025091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
122025091
NCBI-ProteinID:
XP_042439784
LinkDB
All DBs
Position
9B:complement(13676753..13682419)
Genome browser
AA seq
493 aa
AA seq
DB search
MKELPKRAADSNFFDPNSDEFVDRESTAANSEHKSLHRKSSKASSFLASFFTPTFSIFER
HSSLFPDEDKPSKFRSYGWTTALKKLMGSGPMRRLQDHILGLNRAYTLSSTSEIWFLGKC
YKLSPAESISNSAHGNSFAAFLEDFSSRVWITYRKGFEPIGNSKFTCDVNWGCMIRSSQM
LIAQTLILHHMGRSWRKPMQKPYDLQYIEILHLFGDSSSRVFSIHSLLEAGKAYGLAAGS
WLGPYAMCRTWETIINANKEQDDNDKHKQRFPMVLYILSGDKDGEQGGAPIVCIEVAARL
CHDFNKGQQDWAPILLLVPLVLGLEKINPRYVPLLRETFTFPQCLGILGGKPGSSTYIVG
VQDEKALYLDPHEVQSAVDIKMDDREADCSSYHCSTVRHLPLDAIDSSLAIGFYCRDKDD
FEDFCSRATRLADNSSGTPLFTVLQSAQSARPIPDHDSVAVSTSGHIRMDDYSLAESFSE
FDDQNQEGGWQVI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaattgcctaagagagctgcggactcaaatttttttgatccaaattcagatgaa
tttgtagatagagaatctacagctgctaattcagaacataagtctcttcacaggaagtca
tcgaaggcttcttctttcttggcaagtttcttcacaccaacattctcaatctttgaaaga
cactccagcttatttccggatgaagacaaacctagcaaattcagaagttatggatggaca
acagctttgaagaaacttatgggtagcggcccaatgaggaggctccaagatcacatacta
gggttaaacagggcttacactttgagctcaaccagtgaaatatggtttcttggcaagtgc
tataaactctcacctgctgagtcaatatcaaattcagctcatggcaatagctttgctgct
tttttagaagatttttcttcaagagtttggatcacttaccggaaaggttttgaacccatt
ggcaactcaaagtttacatgtgatgtcaactggggatgcatgatcagaagtagtcagatg
cttattgctcagacactaattcttcatcatatggggagatcttggcgaaaacccatgcag
aagccatatgatcttcagtatattgaaattctgcatctttttggcgattctagctcacgt
gtcttttcaatacacagtcttcttgaagctgggaaagcttatggtttagctgccgggtca
tggttgggtccttatgctatgtgtcgaacatgggaaaccattatcaatgctaacaaagaa
caagatgataacgacaaacataaacaaaggtttcccatggttctgtatattctctcaggt
gataaagatggagaacaaggtggagctccaattgtctgcattgaggttgctgctagactc
tgtcatgattttaacaaggggcagcaagactgggcacctatactacttttggttcctttg
gttcttggtctggaaaaaatcaatcccaggtatgttcctttgctacgggaaacctttact
tttccacaatgccttggcattttaggcggtaaacctggatcctcgacctatattgttggt
gtgcaagatgagaaggcactgtacttggatcctcacgaagttcaatcggctgttgatatc
aagatggatgatagggaagcggattgttcttcatatcattgcagtacggtccggcacttg
cccctagatgcgattgactcatcattggccattgggttttactgcagagacaaagatgat
ttcgaagatttctgttcccgtgccactcgactcgcagacaactctagtggaacacccctc
ttcactgtcctccaaagtgctcaatctgctagacccattcctgatcatgactcagtggcg
gtcagtaccagtggccatatccgcatggatgactactcattggccgaaagtttcagtgaa
ttcgacgaccagaaccaagaaggtgggtggcaagttatctga
DBGET
integrated database retrieval system
