Zingiber officinale (ginger): 122025230
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Entry
122025230 CDS
T08725
Name
(RefSeq) protein SHORT-ROOT 1-like
KO
K27743
protein SHORT-ROOT
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122025230
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
GRAS
122025230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
122025230
NCBI-ProteinID:
XP_042439932
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All DBs
Position
9B:complement(28003163..28005298)
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AA seq
524 aa
AA seq
DB search
MDTLFRLFSPQSNSHRQSSYDLSRNSSSSRSSGDPSLHQINGGYYLEQPDYSFPHQDPYS
YRDQECGTNHHGLFMDEDFSSSSSSKHLGGHRPPATPTLVFDPAAAAADLNLDVFSSPIS
SSSASGSGGGGRWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQ
GLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSFGHVAANGAILEAFL
EGTPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSSMQRVMKEIGQR
MEKFARLMGVPFRFNVVHHAGDLSSLDLDTLDLRCDDSVSCLAVNCVNALHAISPNGGRR
GGFLAAIRRLRPQIVTVVEEEADLAGVDGGDEPEEGEAFMKVFQESLRFFTAYMESLEES
FPRTSNERLSLERTAGRAVVDIVSCAPSESAERREKAAVWSRRMRTAGFAPSAFSEDAAD
DVRALLRRYREGWSMRSSTTDADDAGVFLEWKEQAVVWASAWKP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgtttagattatttagtcctcaatccaattcgcatcggcaatcttcctac
gatctgagtcggaattcgagcagctctagatcctccggcgacccctcgctgcaccagatc
aacggcggctactacttggagcagcccgattattcgttccctcatcaggatccgtactcg
tatcgagatcaagaatgcggcaccaaccaccacggccttttcatggatgaagacttctcc
tcctcctcctcctccaagcacttgggtggtcaccgtccgccggccacgccgaccctggtg
ttcgaccccgccgccgcagctgctgacctcaacctcgacgtcttctcctcgcccatctcc
tcgtcctccgcctcggggtctggcggtggggggaggtgggcgtcgcagctgcttctcgag
tgtgcgcgcgccgtggcggcgcgcgacacccagcgagcgcagcagctgacgtggatgctc
aacgagctggcgtcgccctacggcgacgccgagcagaaggttgccgcctacttcctgcag
ggtctcttcgctcggctgacggcgtccgggcagcgaacgctgcgcaccctcgctgccgcc
tccgaccgcaactgttccttcgactccgcccgccggactgcgctgcgtttccaggaactc
agcccctggtcctccttcggccacgtggctgccaacggagccattctcgaagccttcctc
gaggggacgccgcagcggctgcacatcctcgacctcagcaccaccttctgcactcagtgg
ccgacgctcctggaggcgctggccacgcgctccgccgacgacacgccgcacctcaccatc
accactgtggctgcggcctcctcatcgatgcaacgggtgatgaaggagataggtcagcgg
atggagaagttcgctcgtctcatgggcgtgcccttccgcttcaacgtcgtccaccatgcc
ggcgacctatcctctctcgacctcgacaccctcgacctgcgctgcgacgattccgtttcc
tgcctcgcggtgaattgtgtcaacgccctccacgccatctcaccgaacggcggccggagg
ggtggcttcctggccgccatccggaggctgcggcctcagatcgtgacggtcgtggaagag
gaagccgaccttgcgggggtggacggtggcgacgagccggaggaaggggaggcgttcatg
aaggtctttcaggagagcttgcgattcttcacggcttacatggagtcgctggaggagagc
ttcccacgcacgagcaacgagcggctgtcactggagcggacggcagggagggcggtggtg
gatatcgtctcgtgcgcaccgtcggagtcggccgagcgaagggagaaggcggcagtgtgg
tcgagacggatgcgcaccgcaggcttcgcgccatcggccttcagcgaggacgcagccgac
gacgtgagggcgctgctgaggaggtaccgagagggatggtcgatgagatcgtcgaccacg
gacgccgacgacgccggcgtgttcctcgaatggaaggagcaagcggtggtgtgggcgagc
gcctggaagccatga
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