Zingiber officinale (ginger): 122025250
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Entry
122025250 CDS
T08725
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122025250
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122025250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
HTH_29
Motif
Other DBs
NCBI-GeneID:
122025250
NCBI-ProteinID:
XP_042439960
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All DBs
Position
9B:92454996..92468325
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AA seq
467 aa
AA seq
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MTMGWCSNCEECPIYRDPDYSYVCCTLCGRILNQKIYYSRLPFAKDSSGQNRRETGNIIK
TLKYEFSASYLRTLNKGRDAINYIVNTMYINGDTIIDNAHAFYEMVLDQKFTKGRKISHV
AAACLYLSCRRLKQSYLLIDFSEDLQINIYVLGAMFFQLCKTLKLLKHPIVQKIVDPSLF
IHRFTKRLLGKKNDTVSEMALRLVARMERNWIQTERKPKGLCGAALYISVLSHGLNYSKS
DIVSAVRIREATLNRWLIEFENTGIGRSINMGSCDVNMTPYVGYVEGKVSKEPGSTDFAG
HESIDPLTFSEQHGFADSEDDESDHFSFSDIDDDEERKQRLVDEAKDMTRAHIPLDATCQ
ILKRKTFSSKINYEALETLFANEQDTAKKQKVESDVGDPHETLNKDDHVDDLDNKDGDEP
RASENDNYDGCYADDKGDRDEDFDCDDEDEDYDYGDEDYDYGYEDDF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgggttggtgtagtaattgcgaggaatgccccatctatagggatcctgactac
agttatgtgtgctgtaccttatgtggaaggattctcaatcaaaagatttactacagccgt
ctcccttttgcaaaggatagcagtggccagaatcgtcgagagactggtaatatcataaag
actttgaaatatgaattctctgcatcatatttaagaactctaaataaaggaagagatgcg
attaactatattgtaaataccatgtacattaatggagatactataatcgacaatgctcat
gctttctatgagatggttcttgatcaaaaattcaccaaggggcgcaagatatctcatgtt
gcagccgcttgtctctatctttcttgcagacgattgaaacagagctatcttctcattgat
ttctctgaagacttgcagataaatatatatgtacttggagctatgttttttcaactttgt
aaaactttgaaactcttgaagcacccaattgtccagaaaatagtagatccaagtcttttt
atccatcgattcacaaagcgacttttaggcaaaaagaatgatacagtttctgaaatggct
cttcgcttggttgcaaggatggagagaaattggattcagacagagaggaaacccaaagga
ttatgcggtgcagcattatatatatctgtactttctcatggacttaattactccaaatca
gatattgtttctgctgtacgcatccgtgaagcaactttgaatagatggctaatagagttt
gaaaatacagggattggtcgctcaattaatatgggaagctgtgatgttaatatgactcca
tatgttggctatgttgaaggaaaagtatcaaaggaacctggaagtactgattttgcaggg
catgagtcgattgacccattaacttttagtgaacaacatggttttgcagactcagaagat
gatgagagtgatcatttttctttttctgacattgatgatgatgaggaaaggaaacaaaga
cttgttgatgaagctaaagatatgactcgtgcacatattcctcttgatgcaacatgtcag
atacttaagagaaagactttcagctcaaaaatcaattacgaagccctggaaactctgttc
gctaatgaacaagacactgcaaagaaacaaaaagttgaatcagatgttggtgatcctcat
gaaactctcaacaaggatgatcatgtagatgatctagataacaaggatggtgatgagcct
cgagcatctgagaatgataattatgatggttgttatgctgatgacaagggagatagagat
gaagacttcgattgtgacgacgaagacgaagactatgactatggagatgaagactatgac
tatggttacgaggatgatttttga
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