Zingiber officinale (ginger): 122025281
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Entry
122025281 CDS
T08725
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3 isoform X1
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00071
Fatty acid degradation
zof00280
Valine, leucine and isoleucine degradation
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01212
Fatty acid metabolism
Module
zof_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
zof_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
122025281
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122025281
Enzymes [BR:
zof01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
122025281
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Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Motif
Other DBs
NCBI-GeneID:
122025281
NCBI-ProteinID:
XP_042439994
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Position
9B:complement(224033..244591)
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AA seq
830 aa
AA seq
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MVIFTSELLRPVKASDRLDEDALIRYAISNVDGFPQSPARFSVSQFGHGQSNPTYCLEVG
SLDGAVQRYVLRKKPPGILLDSAHAVEREYQILKALGVNTDVSVPKVFCLCTDENIIGTS
FYIMEYLEGRIFLDTKLPGLSPDRRRLIYEATAKTLASLHKVDVDAIGLQKFGRRENYCR
RQVERWAKQYLSSTGQGKPERNPKMLDLIVWLRKNIPAEDSLGPSGTGIVHGDYRIDNLV
FHPIKDQVIGILDWELSTLGNQMCDVAHSAMHYILDFAELGEHKSYEGLETSGIPEGIPS
LVEYLALYCSAAGRPWPVREWKFYIAFSLFRGASIFAGVYHRWIQGNASGGERAQNSGKL
VNVLIDAALEFINRESVLPDISSCGIVNPSVAVSLEDENQHSMMVQGLLMPTQKVLNLRK
KLLKFLQEQIYPRESEFYSMAQSSSRWTIHPEEEKLKWLAKQEGLWNLWIPADSAARARK
ILEGEGHVSGGVWTNNLLGAGLSNLEYGYLCEIMGRSIWAPQIFNCGAPDTGNMEVLLRY
GNKEQLKEWLIPLLEGNIRSGFAMTEPQVASSDATNIECSITREGDFYIINGKKWWTSGA
MDPRCKVLIVMGKTDFSAALHKQQSMILVDVNTPGVCIKRPLLVFGFDDAPHGHAEIVFE
NVRVPVKNILLGEGRGFEIAQGRLGPGRLHHCMRLVGAAERGMQMAVERALKRRVFGKLI
AEQGSFLSDLAKCRIELEKARLLVLGAADHLDRFGNKEARKIIAMAKVSTPNMALKVLDF
AIQVHGAAGVSSETVLAHLWAAARTLRIADGPDEVHLGTIGKLELKRAKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcttcacgtcggaactcctccggccggttaaggcttccgaccgcctcgacgag
gatgcgctgattcgttacgccatctccaacgtggatggctttccccaatctccggctagg
tttagcgtctctcagtttggccacggtcagtccaatcctacttattgtttggaggttggc
tcattggacggggccgtccagcgctacgtactgcggaagaagcctcctgggatactcctc
gattccgcccacgccgtcgagagggaataccagattctgaaggctttaggagtcaacaca
gatgtttcagttccaaaagtcttttgtttgtgcactgatgaaaacataattggaacatct
ttctacattatggagtatctggaagggcgaattttcttggataccaagttgcctggactg
agtccagataggaggaggcttatttatgaagcaactgcaaaaactctagcttctttgcac
aaagttgatgtggatgctattggcttgcaaaagtttggaaggcgagaaaactactgtagg
aggcaggtagaaagatgggcaaagcaatatctgtcttctactggtcaagggaaacctgaa
cggaatccaaaaatgttagatctgatcgtttggctcagaaaaaatatcccagctgaagat
tctttgggtccatcaggcactgggattgtacatggggactatcgaatcgataatcttgtt
tttcatcctatcaaggatcaagtaattggcattcttgactgggaactatcaactttaggg
aatcaaatgtgcgatgttgcacacagtgccatgcattatattcttgattttgctgaactt
ggcgaacacaaatcatatgaaggactggagactagcggtattccagaaggtattccgtcc
ctggtagaatacctggcattatattgttctgcagctggaaggccttggcctgttcgtgaa
tggaaattctatattgccttttctttgttccgtggcgcatcaatttttgcaggtgtatac
cataggtggattcagggtaatgcttcaggtggtgagcgagctcagaattctggaaagcta
gtcaatgtcttaattgatgctgcattggaatttattaatcgagaatctgttcttcctgat
atctcttcttgcggaattgtgaatcccagcgtagctgtgtcattagaagatgagaatcaa
cattccatgatggtgcaaggactacttatgcccactcaaaaggttttgaacctcaggaag
aagttattgaagtttttgcaagaacagatatacccgagggaaagtgagttttacagtatg
gcacagtcaagtagccgttggacgattcatccagaagaagaaaagctaaaatggttagcc
aaacaggaaggcctttggaacttatggattccagctgacagtgctgctagagcaagaaaa
atacttgaaggagaagggcacgtttctggtggagtttggactaacaacttactaggtgct
gggctttccaaccttgagtatggatatctgtgtgagattatgggccgttcgatttgggca
ccacagattttcaactgcggtgcaccagacacaggaaatatggaggttttgttgaggtat
ggcaacaaggagcaactaaaagaatggctgattcccttgctagaaggaaacattcgatcc
ggatttgcaatgactgagccacaagttgcatcttctgatgcaaccaacattgaatgctca
ataactagggaaggcgacttctacatcataaatggaaagaagtggtggacaagtggagca
atggatcctagatgcaaagtcctcatagtgatgggaaaaacggatttttctgctgctttg
cataagcagcaatcaatgatcttagtggatgtcaatactcctggggtgtgcataaaaaga
cccttgctcgtttttggttttgatgatgcacctcatggccatgctgaaatagtttttgaa
aacgtccgtgtacctgtgaagaatattcttctgggggaaggccggggatttgagattgcc
caaggtagacttggaccaggcagattacatcattgcatgagacttgtaggagctgcagaa
cgtggtatgcagatggcagttgaaagagcactcaagaggagagtctttggaaagttaata
gctgaacagggatcatttttatcagaccttgccaagtgtcgcattgaattggagaaagca
aggctgcttgttctcggagctgctgatcatcttgatcgttttgggaacaaggaagctcga
aaaataattgctatggccaaggtatcaacgccaaatatggcattgaaggtgcttgacttt
gcgatccaagttcatggagctgctggtgtatcgtcagaaactgttctggcacatttatgg
gctgctgctcgcactctgcggattgctgatggtcccgatgaagttcatctaggaaccata
ggcaagttagagcttaaaagagccaagctttag
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