Zingiber officinale (ginger): 122025335
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Entry
122025335 CDS
T08725
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122025335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122025335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122025335
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122025335
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122025335
Exosomal proteins of other body fluids (saliva and urine)
122025335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Fusion_gly
DAM-like-phage2
T2SSF
ETRAMP
DUF6548
DUF2116
DUF2383
DUF6584
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122025335
NCBI-ProteinID:
XP_042440065
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All DBs
Position
9B:20513449..20516484
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AA seq
303 aa
AA seq
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MNNLLTESFGRVSGCYPGEGDIESRGVSPEAKDMEGFFKHVGEIEQETEKINEYFLKLQS
TNKESQLVTKASDMKGIKKQMEKDVDEVKKITLKIKAMLEQLDRENLSNRQKPGCEKGTA
IDRSRIGMTVALKKKLKERMTQFQTLRQTIQDEHREVVERRVFTVTGERPDEETVEQLIE
TGRSEQIFEKAIHNCGRGQVVDTLAEIQERRDTMLELEQKLINLQQMFLDMAVLVDAQGD
LLDNIETQVTKSVSHVEKARETLQEAKKLQKNTRKYMCIAIIILIIVILIAIGGVMTGAS
KSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcttctgacggaatcatttggaagggtaagcggttgttaccccggcgaggga
gacatcgaatcaagaggggtttcacccgaagccaaggacatggaagggttcttcaaacat
gttggggaaatagagcaagagactgagaaaataaatgaatacttcctcaagctacagtct
acaaacaaggagtcccagcttgtaacaaaggcatcagacatgaaaggcatcaaaaaacag
atggagaaggatgtggatgaagttaagaaaatcactttgaagatcaaagcaatgctagag
caactcgacagagaaaacttaagcaataggcagaaaccggggtgcgaaaaagggaccgct
atcgatcggtctaggataggaatgactgtggctcttaaaaagaagctgaaagagagaatg
acacagtttcagactttgagacaaaccatccaagatgagcaccgggaggtagtcgaaaga
agagtattcacagtgacaggggaaaggcctgatgaggaaacggtcgaacaattgatcgaa
accggaagaagtgaacagatattcgagaaggcaatccacaattgcggccgcggacaagta
gtggatacactggcagagatacaagagaggcgcgacaccatgctcgagttagagcaaaag
cttatcaatctacaacaaatgttcttggacatggcagtgttggtagatgcccagggagat
ctactcgataacattgagacacaggtcaccaaatcagtgtctcatgtggagaaggcgagg
gaaactctacaagaagccaagaagctacagaagaacacaaggaagtacatgtgcattgcc
atcatcatcctgattattgttattctaattgcaattgggggagtaatgacgggagcaagt
aaatctgcttaa
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integrated database retrieval system