Zingiber officinale (ginger): 122025410
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Entry
122025410 CDS
T08725
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like isoform X1
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122025410
Glycosyltransferases [BR:
zof01003
]
O-Glycan biosynthesis
O-linked Gal type
122025410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gal-bind_lectin
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
122025410
NCBI-ProteinID:
XP_042440147
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Position
9B:complement(40429585..40433746)
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AA seq
699 aa
AA seq
DB search
MRRPKPDPSVPVRRRRFVQFLLGVGLIYLSFLLLFEFPFVNLQLRMKGAGGIVGGDEVPR
RLALVKEERTQVKYSPSRSFMLPHRSDESAASPLQQRPTLLHRQSLIVSALDFVELYSSG
TGAFSDLYKSARDAWELGKKILEELKAPPPPSSSVPAMERSAEESCPISIQLSGEELQVR
NRVMVLPCGLTLGSHITLVARPRRSHGESNPKIPSLKEGEHSVTMSQFMMELQGLKTVDG
EQPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGTSQRCEGKKSKDDEETVDGLVKCEEW
IQDVDNKVKKSKMASWFNTLIGSTKNSLDRPYPFVEGNLFVLTLTAGLEGFHVNVDGRHV
TSFAYRTGFVLEDATGLSLNGDLDIESIYAASLPAIHPIFAPQRHLEMSAQWQAPPLPDQ
PIELFIGILSAGNHFAERMAIRKSWMSAVRESSNVVARFFVSLVTLELLCVALVLVLLVH
NFMFQYWQHGRKEVNMELKKEAEFFGDIVIVPYIDSYDLIVLKTVAICEYGARTLPANYI
MKCDDDTFLRLDSVLKEVNKVPTDTSLYIGNINYYHKPLRSGKWAVTYEEWPEKDYPPYA
DGPGYVVSADIAYFVISEFEKHTLKLFKMEDVSMGMWVERFNNSNPVKYVHNVKFCQFGC
INDYYTSHYQSPRQMICLWEKLQAGRPQCCNMRYGAKRA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggccgaagccggacccctccgttcctgtgaggaggaggaggtttgttcagttc
ctacttggcgttgggctcatatacctctccttcctcttactcttcgagtttccgttcgtc
aacctccagttgcggatgaaaggtgctggtgggattgttggcggcgacgaggtgccgcgc
cgacttgcccttgtcaaagaggagaggacccaagtgaagtactccccgagtcgctccttt
atgcttcctcatcgatcggatgagtccgctgcttctccgctccaacaacgcccgactctt
ctgcaccggcagtcgctgattgtctctgcattggattttgtggagctgtactccagtggg
actggagccttctcggacctctacaaatcggcaagggatgcgtgggagctgggaaagaaa
atattagaggaactgaaagctccaccgccgccatcttcttcggtaccggcgatggaaaga
tcggcagaagagagctgcccgatctcgatccagttatcgggggaggagctccaggttcga
aacagagtgatggtgctgccctgtgggctcacactggggtcccacatcacattggtggca
agacctcgccggtctcatggggagtctaacccaaagataccgtctttgaaagaaggggag
catagcgtcacgatgtctcaattcatgatggagctgcagggactcaagacagtggatgga
gaacaaccaccaaggatcctccacttcaaccctcggttgaggggggattggagtggaaaa
cctgtgatcgagcagaacacctgctaccgcatgcaatggggcacttctcagcgatgcgag
gggaagaagtccaaggatgatgaggagacagttgatgggttagtgaaatgtgaagagtgg
attcaggacgttgataataaagtgaaaaaatcaaagatggcttcgtggttcaatactttg
ataggttccacaaagaactcactcgatcggccatatccatttgtagagggcaacttattt
gttctgactctaactgctggcctagaaggtttccatgtgaatgttgatgggaggcatgta
acatcctttgcttatcgcactggttttgttctagaggatgccactggcttgtcactgaat
ggagatcttgacattgagtccatatatgctgcttctttgcctgccattcatcctattttt
gccccacaaaggcatcttgaaatgtctgcacaatggcaggctcctccacttcctgatcaa
cccattgaactattcattggcatactttcagcgggcaaccattttgcagagcgcatggca
atcagaaaatcatggatgtctgctgtcagggaatcatcaaatgttgtagcacgtttcttt
gtttcattggtaactcttgagctgctttgtgttgctcttgttcttgtacttttagtccac
aattttatgtttcagtattggcagcatgggaggaaggaagtgaatatggagctaaagaag
gaagctgaattctttggggacattgtcatagttccctacatcgacagctatgatttaatt
gttctgaagacagttgctatttgtgagtatggggctcgaaccttacctgccaattacata
atgaagtgcgatgatgacacatttctgagacttgattcagtgctcaaggaagttaataaa
gtgccaactgatacaagtctatacatagggaacattaattattaccataaaccccttcgt
tctgggaaatgggctgtcacatacgaggaatggcctgaaaaggactacccaccttatgca
gatggcccgggctatgttgtctcagctgacattgcatactttgtcatatcagagttcgaa
aaacatacactaaaattatttaagatggaagatgtgagcatgggcatgtgggtggagaga
ttcaataattctaatcccgttaagtacgtgcacaacgtcaagttctgccagttcgggtgc
atcaatgattattacacttcgcattaccaatctcctaggcagatgatatgcttgtgggag
aagttgcaggccggaaggccgcagtgttgcaacatgagatatggtgcaaagcgtgcctaa
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