Zingiber officinale (ginger): 122025426
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Entry
122025426 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122025426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122025426
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122025426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
RuvB_N
AAA_22
PRS7_OB
nSTAND3
DUF815
IstB_IS21
AAA_7
AAA_33
TIP49
Parvo_NS1
AAA_14
RNA_helicase
Mg_chelatase
AAA_18
Sec8_N
Sigma54_activat
Prot_ATP_ID_OB_N
AAA_28
AAA_3
TsaE
AAA_24
NPHP3_N
AAA_lid_PRS2_C
NACHT
AAA_11
bpMoxR
ABC_tran
ATPase
ATPase_2
ResIII
PhoH
AAA_25
AAA_30
Vpu
Motif
Other DBs
NCBI-GeneID:
122025426
NCBI-ProteinID:
XP_042440165
LinkDB
All DBs
Position
9B:143406..148692
Genome browser
AA seq
399 aa
AA seq
DB search
MSEGGEDAVRRRNSVADYRKKLLQHKELDSRIRTLRENLRASKKEFNKTEDDLKSLQSVG
QIIGEVLRPLDIERFIVKASSGPRYVVGCRSKVEKEKLTSGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFSKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaggcggagaagatgctgttcgtcgcagaaactcggtggcggactaccggaaa
aagcttctccagcacaaggagcttgattccaggatcagaacgctgagggaaaatttgaga
gcctcaaagaaggagttcaataaaactgaggatgacctgaagtctctccaaagtgtaggg
caaattattggagaggtacttaggccactcgatattgagcgatttattgtaaaggcaagc
agtggaccaagatatgttgtcggttgccgtagcaaagtggagaaagagaagctgacatct
gggacccgtgtggttcttgacatgactactctcacaattatgcgtgcccttccacgtgag
gttgatcctgttgtgtataacatgctccatgaagatcctggaaatgttagttactctgct
gttggtggactatctgatcagataagggaactgagagagtcaattgaactgccccttatg
aatccagaactctttctcagagtaggaattaaacctccaaagggagtgctcctctatggg
ccgcccggtactggaaagacactactggctagagcaattgctagcaacatagatgcaaac
tttctgaaggtcgtctcaagtgctataattgacaaatatataggtgaaagtgcgcgactg
ataagggagatgtttggttatgcacgtgaccaccaaccttgtattattttcatggatgag
attgatgccattggggggcgtcgttttagtgagggaactagcgctgatcgggagattcaa
cgaacattaatggaattgctcaatcaactggatgggtttgatcaactagggaaggttaaa
atgattatggcaacaaatcgaccagatgttctggatccagctcttcttcgccctggccgg
cttgacagaaaaattgagattcctttaccaaatgaacagtcgaggatggaaatccttaag
atacacgctgcaggtatagcaaaacatggtgacattgattatgaggcggttgtaaaactt
gctgagggtttcaatggagcagatcttcgtaacgtatgcacagaagctggtatgtccgca
attcgcgcagaacgggactatgttattcacgaggactttatgaaggctgtgaggaaattg
aatgaagcaaagaagctagaatcaagcgctcattacaatgctgatttcagcaaggattag
DBGET
integrated database retrieval system
