Zingiber officinale (ginger): 122025561
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Entry
122025561 CDS
T08725
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122025561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122025561
Membrane trafficking [BR:
zof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122025561
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
122025561
NCBI-ProteinID:
XP_042440319
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Position
9B:85937360..85943313
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AA seq
565 aa
AA seq
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MVLISLVRDYIGRMLQDIPGMKVLILDSQTVSIVSVAYSQSELLKKEVFLVELVDSMSKE
TMSHLKAVYFLRPSNENIQKLRRQLANPRFGEYHLFFSNILKITQIQVLADSDEQEVVHQ
IQEFFADFCAIDPFHFTLNIPMHHIYMLPTVVDPPSSQSFCDRAVDGIAGVFLALKRRPV
IRYQRTSDIAKRIAQETAKLMYEQESGLFDFRRTEFSPLLLVIDRRDDPVTPLLNQWTYQ
AMVHELIGIEDNKVDLRNIGKVSKDQQEVVLSSEQDNFFKANMYENFGDLGMNIKTMVDE
FQQVAKSNQNIQTIDDMAKFVDNYPEYRKMQGNVSKHVTMVTEMSRIVDERKLMTVSQTE
QELACNGGQAAAFEAVTNLLNNEAISDVDRLRLVMLYALRYEKESPVQLMQLFNKLASCS
AKYKPGLVQFLLKQAGVDRRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQTME
SIIKGRLREVDYPFIGNHFQQGRPQDVVIFIVGGTTYEEARTVALHNASNSGTRFILGGT
AVLNSRRFLRDLEEAQAISRKSNAI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatctctctggttcgtgactacatcgggcggatgctgcaggacatccccgga
atgaaagtcctcatccttgattcgcaaactgtcagcattgtaagtgttgcatatagtcaa
tcagagctgctcaagaaggaggtatttttggtggaacttgttgattccatgtccaaggaa
acaatgagtcacctaaaagcagtttactttctccgtccatccaatgagaatatccaaaaa
ttacgacgtcaattggccaaccccagatttggagaatatcacctatttttctccaatatt
ttgaaaattacccagattcaagtacttgcagactctgacgaacaggaagttgtacaccaa
attcaagagttctttgctgacttttgtgccattgatcctttccatttcactttaaacatt
ccaatgcatcacatatacatgctgccaaccgttgtggatcctccaagttcccaaagtttc
tgtgatcgagcagttgatgggattgctggtgtttttttagcactcaagcgtcgtcctgtt
attaggtatcagcgaacttctgatattgctaaaagaatagcacaagaaactgcaaaactt
atgtatgagcaagaaagtggtctgtttgattttaggcgtacggagttctccccgttgttg
cttgtaattgaccggagggatgatccagttacacccctactgaaccaatggacatatcaa
gcaatggttcatgagctaattggaattgaagataataaagtagatttgaggaacattggc
aaagtctccaaagatcagcaggaggtggtgctttcatcagaacaagataacttcttcaaa
gctaacatgtatgagaattttggggacctcggaatgaatattaagacaatggtggatgag
tttcagcaggtggcaaagagtaatcaaaacattcagacaatagacgatatggcaaaattt
gtggacaattaccccgagtaccgaaagatgcaaggaaatgtttcaaagcatgtaacaatg
gttacagaaatgagtagaattgttgatgagagaaagctcatgactgtttcacaaactgaa
caagagcttgcttgtaatggtggacaagcagcagcattcgaggctgtcaccaatcttctg
aataatgaagctatttctgacgtggatcgattgcggctagtaatgttgtatgccttacgc
tatgagaaagagagcccagttcaattgatgcaacttttcaacaagttagcttcttgttct
gcaaaatataagcctgggcttgtccaattcctcctaaagcaagcaggagttgataggcga
actggagatctctatggtaatcgtgatctactgaacattgctcggaatatggcccgtgga
cttaagggtgttgagaatgtgtatactcaacatcagccacttctattccaaacaatggaa
agcatcatcaaaggacgactaagagaagttgactatccatttatcggcaatcactttcaa
caagggagacctcaggatgtagtgatattcattgttggggggacaacatacgaggaggct
cgcaccgtggctctgcacaatgcttcaaattccggaacacgtttcatacttggaggcaca
gcagttctcaactccaggaggttcttaagagacctagaagaggcacaagcgatatcacgc
aagagcaatgccatctaa
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