Zingiber officinale (ginger): 122025579
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Entry
122025579 CDS
T08725
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122025579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122025579
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122025579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
TPR_28
Mon2_C
Motif
Other DBs
NCBI-GeneID:
122025579
NCBI-ProteinID:
XP_042440341
LinkDB
All DBs
Position
9B:33337994..33347978
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AA seq
1694 aa
AA seq
DB search
MASFQPLGGSSRSGRILAPALDKIIKNAAWRKHSNLVSACKAALDRLETFSDSPDHSSPL
LGIPPPDADFVLHPLVLAIESAYPKVTETALECAQKLFSHGLLRGDINLPADADNTLGSS
ASRLLTSVCSCCGIGDEALELSMLRVFIASVRSPFVLIRDECLAQIIRSCYNVYLGSQSG
ANQLCAKLVLAQIVVIMFTRVEADSPDVRIRIVSIADMMDLSDRNLNDSSLVQSAQNFIN
EVMAGRDADPLPSKSNKEVSLLRDAEGEAVANGGGLSKIREDGLFLFKNLCKLSMKFSTQ
ENPEDPLLMRGKVLSLELLKIGIETAGPLWRANEWFLGAIKQYLCLSLLKNSALSVMSIF
QLLCSIFMGLLSKFRSGLKEEVGIFFPMLILRILENILQPSFLQKMIVLDLLEKICQVSQ
IMVDIFVNYDCDVNSPNIFERVVNGLLKTALGVPPGSATSLSPAQDTTLRIESVKCLNCI
IKSMGVWMDQQLRLGDFAPESHENEHSSENLTSLNGEEGSVTDHDLHSDANHEPSDTASL
EQRRAYKLEFQKGVALFNKKPSKGIDFLIKIKKIGASPEEVASFLKNASGLNPSVVGDYL
GEREDFSLKVMHAYVDSINFEGMNFGEAIRFFLKGFRLPGEAQKIDRIMEKFAERYSKCN
PSSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMSKSEFIRNNRGIDDGKDLPEEYLGSLY
DQIVKSEIKISADISTPQNKQTNGINKLLGFDNIFNLVNWKQSEEKALGASDHLIKHIQE
QFKAKSGKSESMFYIVTDTAILRFMMEACWAPLMAAFSMTLDQSDDMSATAQCLQGFRYA
VHVTSVMHMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIGDGNYLQESWEH
IFTCLSRFEHLHLLGEGAPPDSSFFTAPLTEAEDRAQKITSVKKKGNALQNPAVMAVVRG
GSYDSASMGNKVSALVTSDQMNNFISNLNLLDQIGTFELNHIFAHSQRLNGDAIVAFVRA
LCKVSMTELQSPTDPRVFSLTKIVEIAHYNMNHIRLVWSCIWNVLSEFFVSVGLSENLSV
AIFVMDSLRQLAMKFLEREELANYNFQNEFLKPFVVIMQKSNSSEIRELIVRCVSQMVLS
CVNHVKSGWKSVFMVFTTAAADERKSIVLLAFETMEKIVRDYFPYITETETTAFTDCVKC
LIAFTNSRFNSDASLNAIAFLRFCAVKLAEGGLVCYDNISEGHLGNRDGSDGNLTEKDDL
AFFWLPLLKGLSKLTSDTRPTIRKGALEVLFDILNDHGHLFTDTFWINILKLVIYPIFSN
TRNITVGQVLSVHDSLFPDNDSAKSETDTLAAKCLIDLFVNFFEVLQSHLGNVVGIVTSF
VSSPYKQYANAGMAALLHLTTHLGSKLSEEEWKDILVPLKKSAASMLPVFSSIIRVMQDI
EIPDRSHSDEERYSDHEYINEDEEEANMETASYAIVRMKNHISVQLQIVQVVKKLYEVHR
KCFSAAHVSILLDILTSIASHSSEVSSETTTHQKLQKACSLLEIPDPPVVHFENESYRNL
LKFLQTILTEDPALSDELKIESLVVFVCQKIFKIYLNCAGRQPTDCEISDAVPTVHGILH
LGSAKKEELAARTSLLVLALQVLGGLRQDSFRRSLRIVFPSMVSLVSCEHSSNAVQDELH
DIFHTSIGPLLMNI
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttccaacctctcggcggtagctcccgctccggccgcatcctcgcccccgcc
ctcgacaagatcatcaagaacgccgcctggcgcaagcactccaacctcgtctccgcctgc
aaggccgccctcgaccgcctggagaccttctcagactcccccgaccactcctcccccctc
ctcggcatccctcctccagacgccgacttcgtcctccaccccctcgtcctcgccatcgag
tccgcctatcccaaggtcaccgagaccgccctcgagtgtgcccagaagcttttctcccac
ggcctcctccgcggcgacatcaacctccctgccgacgccgataatacgctcggctcttcc
gcctctcgcctcctcacgtccgtctgctcctgctgtgggatcggcgatgaagccctagag
ctctccatgctcagggtctttattgcctccgtccgttcgcccttcgtgctgatccgcgac
gagtgcttggcccagatcatccggagctgctacaacgtgtaccttggcagccagagcgga
gccaatcagttgtgtgccaaattggtcctagctcagatcgtcgtcatcatgtttactaga
gtggaggctgattccccggatgtcaggatccggattgtttctattgccgacatgatggat
ctatcagataggaacttgaatgattccagtctggtacagtccgcgcagaattttattaat
gaggtaatggcaggaagagacgcagaccccctgccttctaaatcgaacaaggaggtttct
ctgctccgcgatgcagaaggagaggcggttgcaaatggcggtggattgagcaagatcaga
gaggatggtttgtttcttttcaaaaacttgtgcaagctctcaatgaagttctccacgcaa
gagaatcctgaggaccctctcttaatgagggggaaggttttgtcgctggagcttctaaag
ataggaatagagactgctgggcctctttggcgggcaaatgagtggtttcttggagctatc
aaacaatacctttgtttatccttgttgaagaacagtgcactatcagtgatgagtattttt
cagcttctttgctctattttcatgggcttattgtcaaaatttagatcagggctgaaggag
gaagttggaattttctttcctatgcttatcctgcgtatccttgaaaacattcttcagcct
agctttttacagaaaatgattgttctcgacctattggaaaagatctgccaggtttcgcag
attatggttgacatttttgtgaattatgattgtgatgtgaattcaccaaatatctttgaa
agggttgttaatggtcttctgaagacagctctaggtgttcctcctggatcagcaacatcg
ctatccccagcgcaggataccacattacggattgagtcagtgaagtgcctcaattgtatc
attaaatcaatgggtgtatggatggaccagcagctgagattgggtgattttgctccagag
agtcatgaaaatgagcattcttcagagaatcttacttctttgaatggtgaggaaggaagt
gtgactgaccatgatctgcattcggatgcaaaccacgagccctctgatacagcttcactg
gaacaacgcagggcatataagttggagtttcagaaaggtgtcgcattgtttaataaaaaa
ccttcaaagggtattgattttctaatcaaaatcaagaaaataggcgcgtctcctgaagaa
gtagcttccttcttgaagaatgcttctggtctaaatccatctgtggttggagactatttg
ggtgaaagggaagacttctctttgaaagtaatgcatgcatatgttgactcaataaatttt
gagggtatgaattttggtgaagctattaggttcttcttaaaaggtttcagattgcctgga
gaagcacagaaaattgaccgcataatggaaaagtttgcagaacgttacagtaaatgcaac
ccgagttcttttaccagtgcagatactgcttatgttcttgcttattctgtgattatgttg
aacactgatgcacacaacaacatggtcaaagataagatgtcgaaatctgagttcattcgc
aacaatcgaggaatagatgatggaaaggatttaccagaagaatatcttggttctttgtat
gatcaaattgtgaaaagtgaaataaaaatcagtgctgatatttctactccacaaaataaa
cagacaaacggcatcaacaagcttttgggatttgacaacattttcaatttggtcaattgg
aagcaatctgaagagaaggcattaggagcaagtgatcatcttattaagcacatccaagag
caatttaaagcaaaaagtggaaaatcagagtctatgttctatattgtcacggatacagcg
atcctaagattcatgatggaggcttgctgggctcccttgatggctgctttcagtatgaca
ctcgaccaaagcgatgacatgtctgccacagcacagtgtttgcaaggcttccgatatgca
gtgcatgtcacctcagtgatgcatatgcagacacaaagagatgcttttgttacgtcagtt
gctaaattcacatacctccattgtgctgctgatatgaagcagaagaatgttgatgctgtt
aaggctataatatcaattgccattggagatggtaattatctacaagaatcctgggagcac
atatttacatgtctttcacggtttgagcatttgcacctactaggagagggtgcaccaccc
gattcttcattctttacagcaccactcactgaagcagaagacagagcacagaaaataaca
tccgtgaagaagaaaggaaatgctcttcaaaatccagcagtgatggcagtggttcgaggg
ggttcttatgatagcgcatccatgggaaataaggtttctgctttagttacatcagatcag
atgaataacttcatttccaatttaaatctgttggaccagattggtacttttgagctaaac
cacatatttgctcatagccaaagattgaatggtgatgcaattgtagcttttgtgagggcc
ctgtgtaaggtttcaatgacagaattgcaatctccaacagatcctcgtgttttcagcctc
acaaaaatagttgaaattgcgcattacaatatgaatcatatacgattggtttggtcctgc
atctggaatgttctttctgaattttttgtttcagttgggttgtcagaaaatctttcagtc
gcaatctttgtaatggattcactaaggcaattagcgatgaaatttttggagcgagaagaa
cttgctaattataacttccagaatgaattcttgaaaccttttgtggtcatcatgcagaaa
agtaattcttctgaaattcgtgagcttattgttcgatgtgtttctcagatggttttgagt
tgtgttaatcatgtgaagtctgggtggaaaagtgttttcatggttttcacaactgctgcc
gccgatgaacgtaagagtattgtactgttagcttttgagaccatggagaaaatagttaga
gattactttccttacataactgagactgagaccacagcattcactgactgtgtgaagtgt
ctgattgcatttacaaatagcagattcaatagtgatgctagcctcaatgccattgcattt
ctccggttttgtgctgttaaactcgcagaaggaggcctagtgtgctatgataacatttcc
gagggccatttagggaacagagatggttctgatggaaatttgactgaaaaagatgatctt
gctttcttttggctaccgttactaaaaggtttatctaagttgacctccgatactcggcca
actatcagaaaaggtgctctggaagtactcttcgatattctgaatgaccatggtcacctt
tttactgacaccttctggatcaatatcctgaagcttgtgatttaccccatttttagcaac
acacggaatataactgttggtcaagttctatcagttcatgattctctgtttcctgacaat
gattctgcaaaatctgaaactgatactttggcagcaaaatgtttgattgacctatttgtc
aatttttttgaggtattgcagtcacatcttggaaatgttgtaggtattgttacaagtttt
gtgagcagtccctacaagcaatacgctaatgcaggaatggctgccctactccatttaact
acccatctgggaagcaagctatcagaagaagaatggaaagatattttggtacccttgaaa
aagtcggctgcttcgatgctgcctgttttttctagtatcatacgggtcatgcaagatatt
gaaattccggatagaagccattctgatgaagaacgatattctgatcatgaatacattaac
gaggatgaagaggaggctaatatggaaacagcatcttacgcaattgtcagaatgaagaat
cacataagcgttcagctccagattgtacaggttgtgaagaaactttatgaagttcatcga
aagtgcttttcggctgctcatgttagcatcctactggacatacttacatccatcgcttca
cattcaagcgaagtgagcagcgaaaccaccacacatcagaagttgcagaaagcttgctcc
ctcctggaaattcctgatccaccagttgttcattttgagaatgaatcttaccggaacctg
ctcaagttcttgcaaaccatactcaccgaagaccctgctctgtccgatgagctaaaaata
gaatcgcttgttgtgttcgtttgccagaaaatattcaagatctatttaaattgtgccgga
cggcaaccaaccgattgtgagatttcagatgccgtcccaaccgttcatgggatactccat
ttgggcagtgctaagaaagaggaactagctgcgcggacatcattactggtgctggccttg
caagtcctaggtggcttgaggcaggattcattccgaaggagcttgcgtattgttttccca
tcgatggttagccttgtaagctgcgagcacagttccaatgcagtgcaggacgagctacat
gatatctttcatacatcgataggaccactattgatgaacatatga
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integrated database retrieval system
