Zingiber officinale (ginger): 122026242
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Entry
122026242 CDS
T08725
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
Motif
Other DBs
NCBI-GeneID:
122026242
NCBI-ProteinID:
XP_042440835
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Position
10A:complement(96148969..96158887)
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AA seq
1019 aa
AA seq
DB search
MATENPLRFIGNDGAGNWALGKDPSEFSSSGNLVSEDLGSLLEGQKYHGNKGINGLSRSG
SAPPSIEGSCAAFDILKGQIAELDGGLENLNDEAQNCKSEEELRAHPSYLAYYCANVNLK
PRLPQPLISRENRHMMQQIGGIGQSRRLPSFDDNSKTSFFVSRPTLCTHDEEPEDDRAPR
IEPRNWVDKKADIRPFILSDSEGQHNNPVDLVKEDFPHISYPDHSHPSRQLLLEQESNHD
SFLNDVHDSSVSMTMLEPRKNSVGLHSSSLHTSSHSVGSILRGDLGGMPILSATLTERTV
NQMETSKAVSNFENSVSPSPVIGLGLGNIKDEMRKLRLSSDGHSTSQSRRHPQPGNLHSQ
GSFARAQVGQSQMISQGIQHSQSPHGHPKLSVAEVQPLSPSSSISPLYITAAAYGTPYYH
SLQSSSLLPSQFSTSECTLNPSLVPPFDPSLVPPFVTAYSYHQNAIPVPFENAVGSNFST
RVPVVSSGGNGFFGVDIQQLYKMYGQLGLAMHSPLTDPSYMPFYQHHSINAYSTATADQY
ESMISRGNAVGSLPGLYDPQQAQGSSSYLADQLPQVTRVSGVNTLNVTRGGSVSPTYYRS
PTNIGVMMQFSNSPMGSPVFQRPPVAGTSFSGRENENVKFTFNSERHPGSLSGRQSQRGR
EKFDDSKTYSLLEELKSNKAHRYELSDIVGRVVEFSADQHGSRFIQQKLETCSVDEKASV
FSEVLPHSSSLMTDVFGNYVIQKFFERGSPEQRKELANKLVGNVLALSLQMYGCRVIQKA
LEVIHLDQKTQLVQELDGNVMRCVRDQNGNHVIQKCIECIPAEKIGFIISAFHGQVATLS
THPYGCRVIQRVLEHCSDESQSQFIVDEILQSACLLVQDQYGNYVTQLCHFQHVLERGKA
HERSEIISKLFGQIVQMSQNKFASNVIEKCLAYGSTEERDLLIKEMVGQTEGNDNLLVMM
KDQFANYVVQKILETCTDKQREILLDRIKVHLPALKKYTFGKHIVTRIEQTYGEDALES
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggccacagagaatccactgagattcatagggaatgatggagctgggaactgggccctt
ggaaaggacccatcagaattctcatcttcaggtaatttagtttcagaagatttgggttca
cttttggaggggcaaaagtaccatggaaacaagggtatcaatggtctcagtcgaagtgga
agtgcgccaccaagtattgaagggtcttgtgcagcatttgatatcttaaaaggccagatt
gctgaattggacggtggcttggagaacttaaatgatgaagcacaaaattgtaaatctgaa
gaggaactacgtgctcatccatcctatttagcatactactgtgctaatgtaaacttgaaa
ccaaggcttcctcagcctcttatctctcgggagaaccgacatatgatgcaacagattgga
ggaattggtcagagtaggagattgccttcatttgatgacaacagcaagacatctttcttt
gtctctcgacctaccctatgtactcatgatgaggaacctgaggatgatagggcacctaga
attgaacccagaaactgggtagataagaaagctgatattcgtcctttcattttgtctgat
tctgaagggcagcataataatccggtagatctagtgaaggaggattttcctcatatttca
tatcctgatcattctcatccttcaagacaattattgctagagcaagaatccaatcatgat
tcctttttgaatgatgtacatgattcttccgttagcatgactatgctagaaccaagaaaa
aacagtgtgggcctccactcttcttctcttcatacaagttcacattcagttggatcaata
ttgagaggtgatctgggtggcatgccaattttatctgcaacattgactgagaggacagtt
aaccaaatggaaactagcaaggctgtcagcaattttgagaacagtgtttcacctagtcct
gtgattggattaggtcttggtaatatcaaggatgaaatgagaaagctaaggttgtcttct
gatggacattcaaccagccaatcaaggcgtcaccctcagccaggtaatttgcattcacaa
ggctcatttgctcgagctcaggttggtcagtctcagatgatttctcaaggaatacaacat
tctcaaagtcctcatggccatccaaaattgtcagtggctgaggtgcaaccactgtcacca
tcttctagcatttctcccttgtacataacagcagcggcatatggtactccatattaccat
agtttgcaatctagtagcctacttccttctcagtttagcacaagtgaatgcacattaaat
ccctcgctagtgcctccatttgatccctcgctagtgcctccatttgtcactgcttattct
tatcatcaaaatgctattccagtgccttttgagaatgcagtcggatctaactttagtact
agagttccagtagtttcttcagggggaaatggtttttttggagttgacatccagcagtta
tataagatgtatggtcagttgggtttagctatgcattctcccttaactgatccttcgtat
atgcctttttatcaacatcattcaatcaatgcttatagcactgcaactgcagatcaatat
gagtcaatgatatccaggggaaatgctgtagggagcttaccaggcctctatgatccacaa
caagctcagggttcttcttcatatctagctgatcaactacctcaagtcacgagagttagt
ggtgtcaatactcttaatgtcacaagagggggcagtgtcagccctacttactataggagc
cctacgaatattggggtaatgatgcaattttcaaattcaccaatgggcagtcctgttttt
caaagaccaccagtggctggaacaagtttttcaggaagggaaaatgagaacgttaagttt
acattcaactctgagagacatcctggttctttatcagggcgccaaagccaaagagggcgc
gagaagtttgatgattcaaagacgtactctttgcttgaagagctcaagtctaacaaagct
catagatatgaattgtctgacattgttggacgtgtggtggaatttagcgctgaccaacat
gggagtcgatttatccagcaaaagttagagacttgtagtgtcgacgagaaggcttcagtt
ttcagtgaagtacttccacattcctcttcattaatgactgatgtatttgggaattatgtt
attcagaagttttttgaacgtgggagccctgagcagaggaaagagctagctaataaactt
gttggcaatgtcttagctttgagtcttcagatgtatggttgtcgtgttattcaaaaggct
cttgaggtcatccatcttgatcagaaaacgcagcttgtgcaagaacttgatggaaatgtg
atgagatgtgttcgcgatcagaatggaaatcatgtaattcaaaagtgcattgagtgtata
ccagcagaaaaaattggcttcataatatctgcgtttcatggtcaagttgcaacactctct
acacatccttatggttgccgtgtgattcagagagtcctggagcactgtagcgatgaatct
caaagccaattcattgtggatgagattttgcagtcagcttgcctgcttgtacaagatcag
tatggcaattacgtcacccagttatgccattttcagcatgttttggagaggggaaaagca
cacgaaagaagcgagatcatcagcaaattatttgggcaaatcgtgcagatgagtcagaac
aagtttgcttcaaatgttatagaaaagtgtttggcatatggtagtaccgaagagagggat
ctcttgatcaaggaaatggttggacaaaccgaaggaaatgacaatttattggtgatgatg
aaggatcaattcgcaaactatgtggttcagaagattctcgaaacatgcaccgataagcaa
cgggaaatcctgcttgaccgcatcaaagttcatctgccggctttgaagaagtacactttc
gggaaacatatcgtgacccgaatcgaacaaacatacggtgaagatgcccttgaatcctaa
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