Zingiber officinale (ginger): 122026331
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Entry
122026331 CDS
T08725
Name
(RefSeq) cell division cycle protein 27 homolog B-like
KO
K03350
anaphase-promoting complex subunit 3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122026331
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122026331
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122026331
03036 Chromosome and associated proteins [BR:
zof03036
]
122026331
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122026331
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
122026331
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122026331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
ANAPC3
TPR_8
TPR_2
TPR_12
TPR_19
TPR_11
TPR_17
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_7
TPR_9
TPR-S
TPR_6
ARM_TT21_C
ARM_TT21_N
ANAPC8
TPR_MalT
ChAPs
ARM_TT21_2nd
TPR_NPHP3
TPR_15
DUF7017
Motif
Other DBs
NCBI-GeneID:
122026331
NCBI-ProteinID:
XP_042440938
LinkDB
All DBs
Position
10A:complement(98873462..98896685)
Genome browser
AA seq
756 aa
AA seq
DB search
METLMVDSVQNSLRLFMHRNAIFFCERLCAEFPTELNLQLLATCYLQNGKAYCAYQILKG
TSMPHSRYLFAMSCFQMNLLQEAEATLCPANEPNAEVPDGAAGHYLLGLIYRYIGRRGVA
IEHLMQALAIDPLLWAAYDELCVLGAVEDANEYFSDMAAQHIQKQYLSESNSLNSSNGSE
FNNGSSNMSVTFVDSIPRQSKQLLANNAREISSIPPSSAIAKVPASNSGTSNFSQFITPP
AATQLSGVAPPPLCRNVHVSFNVANNDIATKSNNIAVQTPRRKLLDEGKLRKVSGRLFSD
SVPRRSTRLSAEAIAVASSNATQITSNGNSHTSAKFLGGFSSSSSSSSKVNAASSRSLTF
KKGHSWISESFDEGRRSEDFDDSRMENMATTSSYTSMSGDVRYLEQGKTIGDLAQDSRLI
SGAQELLCLLRTLGEGYWLSCSYRCQEALEVYLKLSEKQFNTGWVLSQVGRLHFELVDYY
EADHFFSLARRVSPFILEGMDMYSTALYHMKEEMKLSYLAQELISVDRLSPQAWCALGNC
YSMQKDYETALKIFQRAVQLDSRFVYAHTLCGHEYIALEDFENGIKCYQSALQIDQRHYN
SWYGLGVVYLRQEKFEFAEHHLRKAYNINPQSSVLMCYLGMAQHALQRNEDALEMLERAI
AADKQNPLPVYQKANILSLDRFDEALNVLEQLKESAPHESCVYALMGKIYKRLEVHEKAM
FYFGLALDLKPPAADVATIKAAMEKLYLPDEMDDIL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctaatggtggatagcgttcagaacagccttcgcctcttcatgcaccgcaat
gctattttcttctgcgaacgcctctgcgccgagttccctaccgagctcaatttgcaactc
ctggcaacttgctacttgcaaaatggaaaagcatattgtgcctaccaaatactgaaaggg
acaagcatgccacattcccgctacttgtttgcaatgtcatgtttccagatgaatcttcta
caagaagctgaagcaacactatgtccagctaatgaaccaaatgccgaggttccagatgga
gcagctggccattaccttcttggcctcatatataggtacataggcagacgaggcgttgct
attgaacacttaatgcaggctttggccatagatcctctgctatgggctgcatatgatgaa
ctgtgtgttctgggtgctgtagaagacgcaaatgagtactttagtgatatggctgcccaa
cacattcagaagcaatatttatctgagtcaaattcacttaattcgagcaatggcagtgaa
ttcaataacggatcttctaatatgtcagtgacctttgtggattcaattccaagacaatca
aagcaacttctagcgaataatgcaagagagatatcctctattccaccaagttctgcaatt
gcaaaagtgccagctagtaacagtgggacttcaaatttttcacaatttatcactcctcca
gcagcaactcagctctctggagtagctcctccacctctctgtcgaaatgtgcatgtctcc
ttcaatgtagccaacaatgatatcgctacaaagtccaataatatagcagttcaaacacct
aggaggaaattgttggatgaagggaaactacgaaaggtttcagggagattgttctctgat
tcagtgccacgccgtagtacaagactgtcagcagaagcaatagctgttgcgagttcaaat
gctactcaaataacttcaaatggaaatagtcacacttctgctaagttcctaggaggattt
tcttcatcgtcatcatcatcatcaaaagtgaatgcagcatcctcacgttctttgacattt
aagaaaggacattcttggatctctgaaagttttgatgaagggaggcgatccgaagatttt
gatgattctcggatggagaatatggcaacaacttcctcttatacatcaatgtctggtgat
gttagataccttgagcaaggtaagacaattggagatttggcacaagactcaagattgatt
agtggtgctcaggagctattgtgcttactgagaacactcggagaaggctactggctttcc
tgttcatataggtgtcaggaggcactggaagtttacttgaaactttcagaaaagcaattt
aatactggatgggtgctatcccaggtgggaagactacatttcgaactggttgactattat
gaggcagatcacttctttagtttggcacgccgtgtatccccattcattctggagggaatg
gatatgtattccactgctctttatcatatgaaggaggaaatgaaattgagttaccttgct
caagagcttatatcagttgacagattatctcctcaagcttggtgtgcgttgggcaactgc
tatagcatgcagaaagattatgagactgcactgaaaattttccaacgtgcagtgcaactg
gattcaagatttgtgtacgcgcacactctttgtggtcatgagtacattgctttagaggat
tttgagaatggaataaaatgctaccaaagtgcacttcaaatagaccagaggcattataat
tcttggtatggacttggggtggtatacctacggcaggagaaatttgaatttgctgaacat
cacctccgaaaagcatacaatataaatccacagtcttcggttctcatgtgttacctcggg
atggcacaacatgcattgcagaggaatgaagatgcactggaaatgctcgaaagggcaatc
gctgctgacaagcagaatccacttcctgtataccagaaagccaacatacttagtctcgac
cgctttgatgaagcactaaatgtgttggagcagcttaaggagagtgcgcctcatgaaagc
tgtgtgtacgcgctgatgggtaagatctacaagcgacttgaagtgcacgaaaaggcaatg
ttctactttggccttgcattggatttgaagcctcctgctgccgatgttgccaccattaag
gcggcaatggagaaactatatcttcccgatgaaatggacgacatcctttag
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integrated database retrieval system
