Zingiber officinale (ginger): 122026349
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Entry
122026349 CDS
T08725
Name
(RefSeq) DNA-directed RNA polymerase 1B, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zof03029
]
122026349
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122026349
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
122026349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Flg_bbr_C
Motif
Other DBs
NCBI-GeneID:
122026349
NCBI-ProteinID:
XP_042440969
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All DBs
Position
10A:18596273..18608372
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AA seq
998 aa
AA seq
DB search
MWRSIARTGVRSSRNLRLPGGRSDTHPSVSGFLGSSPNSFPREESKFLDAPLAAKLLGAG
CRRDGECLPDLWRMNPSILGASELISNSRSFSSVAKTVSSSDEAAFTDADEDISISGVVQ
PLFQLKNNDVSRGKDKEEGVISEIKLNHPREIEGTDSAKYAALHQRQIKLETDAWEAAAK
EYKELLMEMCKKKLAPNLPYVKSLFLDWFEPFRDQIAAEQERCKGQTKLPYAPFFNLLPA
DMMAIITMHKLMSLLMTGSGDGIVRVGPASCNVGEAIEQEVRIHSFLEKTKKKDSKKKIT
EEEEGDTVTKDQQFLRKKVKTLIKKQKLRQVAQIVKDQDDSKPWGLDMHAKVGSRLIDLL
LETAYIHSPASQSADGLVAIRPAFRHCHRTRTNDQQKPGRLFGVIECDPLVRQGLDKTAT
HIVMRYMPMLVPPVGWTGYNKGGHFFLPSYVMRIHGARQQREAVKRTPRKQMQTIFEALD
TLGSTKWRVNKGVLSIVERIWSNGGCLAGLVDREVIPLPEKPDTEDETELRAWKLKMRFV
KKKISERHSQSCDVELKLSVARKMEDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI
LEFAEGRALGKSGLRWLKIHLANLYGGGVNKLSYDGRIAFTESHLEDIFDSADRPLEGGR
WWLDAEDPFQCLSVCINLAEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAA
VNLVDGDKPADVYSGIAAGVQKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTS
VYGVTYIGARDQIKRRLKDRGVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGD
CAKIIATKNHAVRWTSPLGLPVVQPYRALGTQLVRTSLQVVSLQKETDKVLVKRQRTAFP
PNFVHSLDGSHMMMTAVACKRAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPIL
ENLLESFQQNFPTLEFPPLPERGDFDPRDVLNSTYFFN
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcagcattgcaagaacgggagtccgatcctctcgtaacctcagattgcctggt
ggtcggtcggatacgcacccttccgtctcgggatttctaggttcctctccaaattcattc
ccacgcgaggaaagtaagttcttggatgcgcctctagctgctaagctcttgggcgccggg
tgccgacgggatggagagtgtctgccggatttatggcgtatgaatccgtcaattttgggg
gcatctgagttaatttcgaattccaggagcttctccagcgtcgcaaagactgtctcttct
tctgatgaggctgcctttactgatgctgatgaagatatctcgataagtggggtggtgcag
cccttgtttcagttgaagaataatgacgttagccgaggcaaggacaaggaggaaggggtt
atatctgagattaagctgaatcatccgagggagatagaaggaaccgattcagccaagtat
gcagctctacaccagagacaaataaagttggagactgacgcttgggaggcagcagcaaaa
gagtataaggaactcttgatggaaatgtgcaagaaaaagctagcccccaatttgccatac
gtcaagtccttgttcttggactggtttgaaccattcagggatcagatagctgcagagcag
gaaaggtgtaagggtcaaacaaagttaccatatgctccgtttttcaatctccttccagca
gatatgatggcaatcatcaccatgcacaagcttatgagtcttctaatgacgggtagtgga
gatgggattgtccgtgtaggtccagcttcatgcaacgttggtgaggctattgagcaagag
gttagaattcacagttttttagagaagacaaaaaagaaagatagcaagaaaaagataact
gaagaagaggagggcgacactgtgacaaaggatcaacagtttttgaggaagaaggtaaaa
actttgataaagaagcagaagcttcgccaagtagcgcagattgttaaggaccaagatgac
tcaaagccttggggtctggatatgcatgccaaggttgggagccgtttgattgacctatta
ttggagactgcttatatacactcccctgctagccagtcagcagatggtcttgtagctatt
cgaccagcattcagacactgccacagaactaggaccaatgatcaacaaaagcctggccgc
ctttttggggttatcgaatgtgatccattagttcggcaaggattggacaagacggcaaca
cacattgttatgcgttacatgcctatgttggtgcctccagttggttggacagggtacaac
aaaggaggacatttttttctaccatcttatgtaatgagaatacatggggcaagacaacaa
agggaggcagttaaaaggactccaagaaagcagatgcaaactatcttcgaggctctggac
acgcttggtagtactaaatggagggtaaacaaaggggtacttagtattgtagaaagaata
tggtccaatggaggatgtcttgctggcttggttgaccgtgaagttatccctcttcctgag
aaacctgatactgaagatgagactgaacttcgggcgtggaagttgaaaatgagatttgtt
aagaagaaaattagcgaaagacattctcaaagctgtgatgtggaacttaaactctctgta
gctagaaagatggaagatgaggagggattctattatccacacaacctggacttcagaggg
cgtgcttatccaatgcacccctacctaaaccatcttggttctgatttatgccgaggaatt
ttagagtttgcagagggaagggcacttggaaaatctggcttacgttggttaaaaattcat
ttagcaaatttatatggtggtggagtgaacaagttgtcttatgatggtcgaatagcattt
acagaaagtcacttggaggatatatttgactctgcggatagaccacttgagggtgggcgt
tggtggttagatgctgaagaccccttccaatgcctgtcagtttgtatcaatctcgctgag
gcattaagaagctcttctccagaaactacaatttcacacatacctgtacatcaggatgga
tcttgtaatggacttcaacactatgcagctttaggaagagataagtttggggctgctgcg
gtaaacctagttgatggagacaagcctgcagatgtttactcgggcatagctgctggggtc
caaaaaatcatgcaacgagatgcacagcaagatcctgctgaaaacccaaatgctttactg
gccagagtattagttggtcaggttgataggaagttggtgaagcagactgtcatgacgtct
gtttatggtgtaacttatattggagctcgagaccaaataaaaagaagattaaaggatcgt
ggtgtttttgctgatcaaagagagctatctagtgctgctagttatgctgctaaaacgacg
ttgactgcattaggggagatgtttgaatctgcacgttgtattatgaactggcttggtgat
tgcgcgaagattattgctacaaaaaaccatgcagtgaggtggactagtcctcttggactt
cctgtagttcagccatatcgtgcacttggaacacaacttgttagaacatctcttcaggta
gtgtccttacaaaaggaaactgacaaggtcttggtgaaacgacaaagaacagcatttccc
ccaaactttgttcactctcttgatggctctcacatgatgatgactgcagttgcctgtaaa
agagcaggattaagctttgcaggagtccatgattcattctggacacatgcatgcaatgtc
gaccagatgaatacaattcttcgtgaaaagtttgtggaactctatgagaagcccatattg
gaaaatctactggaaagctttcagcaaaactttccgaccttagaattcccacctttgccg
gagcggggagattttgatccgagagatgttctgaattctacttattttttcaactaa
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