Zingiber officinale (ginger): 122026388
Help
Entry
122026388 CDS
T08725
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122026388
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122026388
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122026388
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122026388
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122026388
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122026388
Prokaryotic type
122026388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
122026388
NCBI-ProteinID:
XP_042441026
LinkDB
All DBs
Position
10A:complement(50874269..50905998)
Genome browser
AA seq
1061 aa
AA seq
DB search
MAPPMDDKLENPNKVDKIDDQDLERKIKKEQKAKLKEEKKLKAAQKAEAAKLQAQKPTDD
PKKSDRRQRRRDVDEERTEDFIDPDTPDGQKKQLSRQMAKQYNPSVVEKSWYSWWEASGF
FVADANCSKPPFVIVLPPPNVTGALHIGHGLTAAIQDTIIRWRRMSGYNVLWVPGMDHAG
IATQVVVEKKLMRESKLTRHDIGREKFVSEVWKWKNDYGGQILNQERRLGASLDWSRECF
TMDDARSKAVTEAFVRLYKKGLLYRDHRLVNWDCTLRTAISDIEVDHEEITEETYRKVPG
YEHEVQFGVLTSFAYALEGGMGEIVVATTRVETMLGDTAIAVHSKDKRYAHLHGKCAVHP
FNERKLPIICDDILVDPEFGTGAVKITPAHDPNDFEVGKRHNLAFINIFTDEGKINSNGG
ADFEGLPRFAARVAVVEALKAKGLYRGAQKNEMKLGICSRSNDVVEPMIKPQWFVDCKSM
AKLALDAVMSDDKKIEIIPHQYEQEWKRWLENIRDWCISRQLWWGHRIPAWYVTIEDDQL
KDVGSYNDHWVVGRNEQEAIIEAKKIFSGKKFEIAQDPDVLDTWFSSGLFPLSVLGWPDV
TPDFKAFYPTTVLETGHDILFFWVARMVMLGMQLGGDVPFRKVYLHPMIRDAHGQKMSKS
KGNVIDPLEVTNGVSLEGLHKRLEASNLDRSELEKAKLDQAKDFPNGIPECGADALRFAL
VSYTAQSDKINLDVLRVIGYRQWCNKLWNAIRFAMMKLGDDYAPPEKLDVKFMPPVCQWI
LSVLNKAIAKTISSFELYKFSDATTAVYAWWQFQLCDVFIEAIKPYFIDSKFESARADAR
HTLWICLDTGLRLLHPLMPFVTEELWQRLPQIEGSCREESIMISDYPSVIEAWSNEKIEN
DMEIVNATVRKLRSLRPQSDRSERYPAFAICRQHDIANTMRTYEFEILTLAAVSSLKVLT
ENDMAPAGCAVDVVNESLSVYLQLQGTLDAEAEREKLRKRREEIQKKHDLLAQEVNNAGY
KEKAPLSIQEEQMRKLNAYLEELKIIDEAEQDLETRICEQK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcccatggatgataagctggaaaatccaaataaagtagataagattgatgat
caagatctggaacggaagatcaagaaggagcaaaaggctaaactgaaagaagaaaaaaaa
ctcaaggctgcacaaaaggcagaggctgcaaaactccaggcacaaaagccaactgatgat
cctaagaagagtgatcgaaggcagagaagaagggatgttgatgaagagaggacggaggac
tttattgaccctgatacccctgatggacaaaaaaagcaactttctcgccagatggccaag
caatataatccaagtgttgttgagaaatcatggtattcatggtgggaagcatcaggattc
tttgtagccgatgcaaactgctcaaaacctccttttgtaattgtcctcccacctccaaac
gtgactggtgctcttcacataggtcatggtcttactgctgctatacaggatacaattatt
cgttggcggagaatgtctggctataatgtcctatgggtgccaggaatggaccatgctggt
atagcaacccaggttgttgtggagaagaagctcatgcgtgaaagcaagttaaccaggcat
gatattgggcgtgaaaaatttgtgtctgaggtttggaaatggaaaaatgactatggtggt
caaatactaaaccaagaacgtaggttaggagcttcgcttgactggtctcgtgagtgtttt
accatggatgatgctagatccaaggcggttactgaagcatttgtcaggctttataaaaaa
ggtttactttacagggatcatcgtcttgtcaattgggactgcacgttacgaactgcaata
tctgatattgaggttgatcatgaggaaattacagaagagacctatcgaaaggtccctggt
tatgagcatgaagttcagtttggtgtcttgacttcctttgcttatgcacttgagggaggc
atgggtgagattgtagtagctaccacaagagtggaaacaatgcttggtgatactgcaatt
gctgttcattctaaggataaacggtatgctcatctacatggaaagtgtgccgtgcatcct
ttcaatgagcggaagctaccaataatatgtgatgatatcctggttgatcctgaatttgga
actggggctgtcaagatcactcctgcacatgatccaaatgactttgaagttggaaaacgt
cataatcttgctttcattaatatttttactgatgaagggaagattaatagcaatggtggt
gccgactttgaagggctgcctagatttgcagcccgtgtagctgttgtagaagcattgaag
gcgaagggtttataccgaggagctcagaaaaatgaaatgaaacttggcatttgttctaga
agtaatgatgtggtggaacccatgataaaacctcagtggtttgttgattgcaaaagcatg
gcaaaactagctcttgatgctgtcatgagtgacgataagaagattgagattattccacat
cagtatgaacaagaatggaaaagatggcttgagaatatacgtgactggtgcatttcgagg
caactttggtggggacatcgcatccctgcctggtatgtgacaattgaagatgatcaactt
aaagatgtgggttcttacaatgatcattgggtggttggaagaaatgagcaggaggcaatc
attgaggcaaaaaagattttctcagggaagaaatttgagattgcacaagatccagacgtg
ctggatacatggttttcatctggtctttttccattgtctgttcttggctggccagacgtt
acacctgattttaaggcattttatcctactactgtgcttgaaactggacatgatatcctt
ttcttctgggttgcacggatggttatgctggggatgcaacttggtggtgatgtgcccttc
agaaaggtatatttgcaccctatgataagagatgcacatggccagaaaatgtcaaagtcg
aaaggcaatgttattgatccgctagaggtaacaaatggagtttcactggaaggcttgcac
aaaaggttggaagctagtaatttggatcgaagtgaactggaaaaggcaaagttggaccag
gctaaagattttcccaatggtattcctgaatgtggtgctgatgctcttcgctttgctctt
gtttcttatacagctcagtcggacaagataaatctggatgtcttgagagttattggctat
cgacaatggtgtaataagttgtggaatgctatacgttttgccatgatgaaacttggagat
gattatgctccaccagagaagcttgatgtgaaattcatgccacctgtttgtcagtggata
ctttctgtcctaaacaaagctatagccaaaactatatcatcctttgaattgtacaaattc
tcagatgcaactacagcagtatatgcatggtggcaatttcagctctgtgatgtattcatt
gaagctatcaaaccctacttcatcgattcaaagtttgagtctgctagagcagatgctagg
catacattgtggatctgtctagatactggcttacgtttgctacatcccttgatgccattt
gttactgaagaattatggcagcgtcttcctcaaatagaaggaagctgcagggaggaatct
attatgatttcagattacccttcagttatagaagcttggtcaaatgagaaaatcgagaat
gatatggagatcgtcaatgctaccgtgaggaagcttcgatccttgcgtccacaaagtgac
agaagtgaaagatatccggcttttgctatttgtcggcaacatgatattgccaacaccatg
aggacctatgagtttgagatactaacacttgccgcagtctcttctttgaaggtcctaact
gagaatgacatggctccagctggatgtgcagttgatgttgtcaatgaatctctgtctgta
tatctccaactccaaggaacacttgatgcagaagctgaacgtgaaaagctgagaaaaaga
agagaagagatacagaagaagcatgatcttttggcacaggaagtgaataacgcaggttac
aaagaaaaagcccctctgagcatccaagaagaacagatgaggaaactaaatgcttatttg
gaagaacttaagattattgatgaagcggaacaggatttggagacgagaatatgcgagcaa
aaataa
DBGET
integrated database retrieval system
