Zingiber officinale (ginger): 122026432
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Entry
122026432 CDS
T08725
Name
(RefSeq) two-component response regulator ORR21-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122026432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122026432
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122026432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122026432
NCBI-ProteinID:
XP_042441105
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Position
10A:21212864..21222092
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AA seq
725 aa
AA seq
DB search
MGTGFANSKIESERVSDKFPVGMKILLVDDDVTCLTVVKRMLLICQYDVTVCAEATSALS
LLRENKSAFDLIISDVHMPDMDGFRLLELVGLEMDLPVIMMSSDTRFDVVMKGVSHGACD
FLSKPVRMEELQNIWQHVVRRKWFENKEIERSGSVEESEHNRHIIDDSEYTSTVNDGPDS
SWKYQKKKRDSKEDDDTELDSVDPTSSKKPRVVWSVELHQQFVNAVNQLGIDKAVPKRIL
ELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNSFSNTLCGASSNAKLGQLGRLDFQT
MAVSGQISPQTLAALQDELLGRPSRSLTMPSMNQPVVQQALVQGNSCVSFERGITFGQPL
LKGQELSSFPVWSSNNLGVVGSSNNLGGLDASQNSNMLMAMLPLPQPQPHSRTISSESNH
AINVQPSCLVAPTKPSDNFQVAVNPMLNHDSVAVPTQSSGSYQAGNAIAPMTQDSVVVPQ
SSTSMKMEKNDVKNLRSTILPSQSYTSISLGNNPGLVNYGSVTIPCQQANKSQSDKTFLM
NHNSLVVPSQSSSTLKTQRDVLVNHNSTRNKDSTHFNYIRLPTKSNVVTSSMAQILDGDF
HNLATAGYLAPETNTSDILLSTGSNTSWQLASSKGIIGQSNVHDFCNVQATDTMSVILSD
KGEGKNLGFVGKGTCLPSRFAVDDIESPTNELTNGITYTGDDAYFLNQDVYGALQSGPCA
TTSYK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggctttgcaaactcaaaaattgagagtgaaagggtttccgataagttcccg
gtgggtatgaagatcctcttggtggacgacgacgtgacctgcttgacggtggtgaagcgc
atgcttcttatttgccagtatgacgttacagtctgtgctgaggctacgagcgctttatca
cttctaagagaaaacaagagtgcttttgatctaataattagtgatgtccatatgcctgat
atggatggatttcgattacttgaattagttggtctagaaatggaccttcctgttatcatg
atgtctagtgatacaagatttgatgttgtgatgaaaggagtaagtcatggggcctgtgat
ttcttatctaagcctgtccgcatggaagagctacagaatatatggcaacatgttgttaga
agaaaatggtttgagaataaagaaattgaacgttcaggtagtgtggaggaaagcgaacat
aacagacatatcattgatgattctgaatatacttccacagtgaatgatgggccagatagc
tcatggaaatatcagaaaaagaaaagagattctaaagaagatgatgatactgaactagac
agtgtagatccaacttcatctaaaaaaccacgggtagtgtggtctgttgaactccatcag
caatttgttaatgctgtgaaccaactaggaatagacaaggcagtgcctaagaggatccta
gaattgatgaatgttcctggtttgacgagagaaaatgttgctagccatcttcagaaattc
agactttacctgaagagattaagtggagtggctcagcaacaaaattcatttagtaatact
ttatgcggagcttcttcaaatgcaaagttgggtcagctgggaagattggattttcaaact
atggcagtttctggtcaaatttctccacaaaccctggctgccttacaggatgaactctta
ggacgcccatctcgcagcttgactatgccatcaatgaatcagccagtagttcaacaagct
ctggttcaagggaacagttgtgttagttttgaacgaggaataacatttggtcagcctttg
ttaaagggtcaggaattatcttcttttccagtttggtcctctaataaccttggtgttgtc
ggttcatcgaacaatcttggaggtctagatgcttctcagaacagtaatatgctcatggcg
atgctgccactgccacagccacagccacattcacgaactatctcatcagaatccaatcat
gcaattaatgtgcaaccatcttgtttggttgcccccacaaaaccatctgacaattttcaa
gttgcggtgaatcctatgcttaatcacgactctgttgctgtcccaactcaatcttcaggt
agttaccaagcagggaatgctattgctccaatgactcaagattctgttgtagttcctcag
tcatccaccagcatgaaaatggagaagaatgatgttaaaaacttgaggtctaccattctt
ccctctcagtcatataccagcatttcattagggaataacccagggcttgtaaactatggc
tctgtgacaatcccttgtcagcaagcaaacaaatctcagtctgataaaacttttcttatg
aatcacaattcccttgtagttccatcacagtcgtcaagcacattaaagacacaaagagat
gtccttgtgaaccataactctactcggaacaaagacagcacccacttcaattacatccga
ctaccaacaaaatcaaatgtggtaacatccagcatggcacaaatattagatggagacttt
cacaatttagctaccgcaggttacttggctccagaaacaaacacttcagatattttattg
agcacaggtagcaacactagttggcagttggcaagttcaaagggtataattggtcagtct
aatgtgcatgacttttgcaatgttcaagccacagatacaatgtcagtgatattgtcagat
aaaggggaagggaaaaatcttggttttgttggtaaaggtacttgcctgccaagccgtttt
gctgtggatgacattgaatcacctactaatgaattgactaatggtatcacgtacactgga
gatgatgcctattttctaaatcaagatgtttatggggcacttcaaagtggaccgtgtgcc
actacaagttacaagtga
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