Zingiber officinale (ginger): 122026616
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Entry
122026616 CDS
T08725
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122026616
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
General mRNP proteins
122026616
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
122026616
NCBI-ProteinID:
XP_042441284
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All DBs
Position
10A:40378086..40387583
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AA seq
346 aa
AA seq
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MACPVTMMRREEVAARMNKEKKKGAPGMPLKASERDVYEFFSQVGKVRDVRLIVDRNSRR
SKGFGYISLSYTYIDTQTRDLSGVAGAAERKIYVGNLHYNITEEQLRQIFEPFGTVDLVQ
LPLDETGQCRGCGFIQFAQLEHARAAQSLNGKLDIAGRIIKVSAVTDHVTVQETGTTTVE
FDDEDGGGLTLNARSRAMLMQKLDRTGTASSIAESLGVPILNGAAPIQQSLSVPVNGVSI
NPAVQQVPAMVEPTECLMLTNMFDPSTETEPDFDFDIKEDVQEECSKYGHVKHIFVDKNS
HGPVYLQFDSVAAASICQRAMQGRWFAGRSVTATCMIFSLLNQIYR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccggtgacgatgatgaggagggaggaggtggcggcaagaatgaacaaggag
aagaagaagggggctccaggcatgcctctgaaagcttctgagagagatgtttatgagttt
ttctcacaagtcgggaaggtgagggatgttcgcttgattgtggataggaactcaagaagg
tcaaagggatttgggtatatttctctttcatacacgtatatagacacacaaacaagagac
ttgtctggtgttgcaggagctgctgaaagaaagatttatgttggaaaccttcactataac
attacagaagagcaacttcgccagatctttgaaccatttgggactgtggatcttgttcaa
ttaccacttgatgaaacagggcagtgtcgaggttgtggattcattcaatttgctcagctt
gagcatgcaagggctgctcaaagtttaaatgggaaattggacattgctggccgcatcata
aaggtttcggctgttacagatcatgtcactgtgcaagagactgggacaactactgtcgag
tttgatgatgaagatggtggtggtttgacactaaatgctcgttctagagctatgcttatg
cagaagctggatcgcaccggaactgcttctagtattgcggagtcacttggagttccaatt
cttaatggtgcagctcccatccagcaatctctcagtgtgcctgttaatggcgtatccatc
aaccctgctgtgcagcaagttccagctatggtggagccaactgaatgcttaatgctgaca
aatatgtttgatccaagcactgagacggagcctgactttgattttgatattaaagaggac
gtacaagaagaatgttccaagtatggccatgtcaagcatatctttgtagacaagaacagc
catggccctgtatatcttcaatttgacagtgtcgcagcagcttcaatctgtcagcgtgct
atgcaaggtcgatggtttgcaggaaggtcagtcacagccacttgcatgatattcagctta
ctgaaccaaatctataggtga
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