Zingiber officinale (ginger): 122026741
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Entry
122026741 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122026741
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122026741
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122026741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
122026741
NCBI-ProteinID:
XP_042441398
LinkDB
All DBs
Position
10A:complement(83799846..83807540)
Genome browser
AA seq
2468 aa
AA seq
DB search
MDPARENEIAMLTRVVGNHLALGQFEALRASLLSLRKRNPELAHQILCAIISEGGRVEGV
LWSESCPSPSHLAWLSLLELSAFGNSAASIGGVDPEVFRLNVEFLLLIQHACSKASNADL
GKNAETSDASESAVQLLNDILNIGLRLLWSGIGYVSDTLGPVSLITKGMLKGLWKFFLDY
PKLFDAICSNIHRQLEILLPAGTADDLNVLSNMRQSVQMAHLDSLTKCTMADDLEGAFSN
LQFLHLEYGVEEEQYKLALQSLVKKAFLQSAYYEKSWLDSRSRMFVMYTAAISTKCIRLV
QIIQAIQDEMVSAEIEFNKISDANVIPLPITKYLETLPRENIDALDGKNFSSEAMKCCMR
DLYHYARISGKHILECIMDTALSAIKREQLEVASHVLSLFPLLQPLVAVLGWDLLSGKTT
LRRRLMQLLWTSKSQVLRLEQFSLYKKQSDEILCVEYLCDVLCFHMDIAHFVACVNSGLS
WNSKNSLLFSQKDKIRNEHENEVLDPFVENMILERLAVQSPMKVLFDAVPGIKFQEAFDI
LNMQPIASTSAAWKRMQDIELVHMLYVLESAVFALGTMERCINNDMNSQLHVAMSYLKNI
QTHMEAIRNISRRIFMVSIIISLLYLDEMSINITDATLVESYSELPQNTVKKSSFDEENK
NIISFMGLLLDILRRNLPSTINEVGNMLDSSVEIAAKQVLEWRTAKSSKFIEDWEWRLTI
LDHLLPVSEFQWTWKEALVIFRAAPSKLLNLCMQRAKYDIGEEAVRRFSLPPEDKAVLEL
SEWVAASFRRASIENAVSHVAEGRANALQKLDLSSLQSQLGSLAAILLCIDVSATSAKSV
DMCKLLLDQAMSVLAVIFPGSSPKPGPSYWEQIQEVATISVTRHILQHLYDLLEQEKSLT
LQEILSEERMIFPVNEPSKKGKRQRAIVILHQMIDDAHQGKRQFLSGKLHNLSKALAVEE
TENNNNNEEGSNSIKMAHSNKGTIVGLGLRAPKSSSLNPSSTESISEITYELKDTGKRLF
GPVTSKPSTYLSSFIIYIATIGDIVDGVDTTHDFNFFSLIYELPKDLLTRLVFDRGSTDA
AGKIADIMGVDFVHEVILACVPPVFPPRSGHGWACIPILPTLSGMSMGRKISLKASTSGS
LEKHGKPLYPLQLSLVKHLAKLSPVRAVLACVFGSTILSSRNESSDSSIHSKGQFLQGPD
TERLFYEFALDQSERFPTLKRWIQQQSNLHKISTTTITSKSDNNVAAIPNGKASRKRVCE
PESDTESEVEEMVIGGHNSPSFSEFTTHNTIAKCAHRSAMLDDFGVDPASYVSFDWENEG
PYGKAVERLIDEGKLLDALALSDRCLRDGASDYLLQLLIEQEEASNLVLPQPHGYVMPNF
GSTSWQYCLRLKDKLLAARLALKYVHRWDLDPAIDVLTMCICHLPQHEPIRSEVLHMRQS
LQRYHHILSADDHYTRWQQVEVDCKEDPEGLALRLAGKGAVSAALEVAESASLPIELRRE
LQGRQLVKLLTTDPLSGGGPAQASRFLSSLHDSDDALPVAIEAMQLLPDLRSKQLLVHFF
LKRRVGNLSDVEVAKLNLWALGLRVLSLLPLPTQQRCSSLHEHPHLILEVLLMMKQLQSA
SLILKEFPSLRDDNLILTYAAKAITINVSAAPREPRISISGSRLKHKVKIGTPSRPNIAS
SIGNWQREARWAFSWATWDSSPKVFQKDAHRKRKISGFMHSDTVAGEGIPGIEEERPTSF
SADGQERLPFVSIAEEWVLTGDQNKDNAVRTSHRYETSPDFTLFKALLSLCSNDMTSSRG
ALQLCVAQMKDILSAQNLPLNASMETISKAYHATETYAQALGYAKSLLKKLAASSEYPNN
YDKYRDVDDSSTETSSSSSGSQYPDDLSELLAQAHTWLGHAEVLQSLLGSGIVASIDDIA
DKESSACLRDRLILNERYSMAVYTCRKCKIDALPVWNAWGHALIRMEHYSEARVKFKQAI
QLHKGDPSSVILGIINIVEGGPPVDVPSSRSMYEHLAKSASTILDDSLSADSYLNILHMP
STFPRSQELSNGRLSFFPSNFEDGPCSNLDSIRYAECMYYLQEYARQETLAFMFKHGRYL
DACLLFFPPNSSPLSQSSQYPAPSPASSPQRADPLATDYGTIDDLCELCVGYGAMDVLHN
IVLERSSVSPEDATLSQYMAAALTRICSYCETHRHFNCLYKFLVIQGDHIAAGLCCIQLC
INSFSQEEAIKHLERAKIHFDEGLSARHRASSETSRLLSKSIRGKSASEKLSVEGVVKFS
ASVSIQIDVVKSLNDSDGPQWKHSLFGNPSEPETFKRRCRVAEALAEKHFDLAFRVIYEF
ELPAVDIYAGVAASLAERKKGGQLTELFKNIKGTIDDDDWDQVLGTAINVYANKHRERPD
RLIDMLISSHRKVLACVVCGRLKSAFQIASRSGSIADVEYVAHQASVANALPVVDMCRQW
LTKYKFGI
NT seq
7407 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgccagggagaatgagatcgccatgctcacccgggtcgtcggaaaccacctc
gctctcggccagttcgaagcactcagagcgtcgctgctcagcctccggaagcgcaatccg
gagctcgcgcaccaaatcctctgcgccatcatttccgaaggaggccgcgtcgaaggagtc
ctctggtcggaatcctgtccctccccgtcgcatctcgcctggctctcattgctggagctg
tccgcgttcggcaattcagcggcttcgatcggaggcgtcgaccccgaggttttccggctg
aacgtggaattccttctcttgattcagcacgcctgctccaaagcctccaacgctgaccta
ggcaagaatgcggaaacatcggacgcatcagagagtgctgtgcagttgctaaacgatatc
ctcaatatcggattaaggttactgtggagtgggatagggtacgtatccgacacccttggt
ccagtttctttaattaccaaaggcatgttgaaaggtttatggaaattttttcttgattat
ccgaagctttttgatgctatatgctcaaacattcatcgccagcttgaaattttactacca
gcaggcactgcagatgacttgaacgttctttccaacatgcgtcagagtgttcagatggca
cacttagattcgttgacgaagtgtaccatggctgatgatttggagggagctttttcaaat
cttcaatttcttcatctagaatatggcgtagaggaagagcaatacaagttagctttgcaa
tcgcttgtcaagaaagcctttttacaaagtgcttattatgagaaatcctggcttgattca
aggagtagaatgtttgtgatgtacaccgcagccatttcaactaagtgtattcgcctagtg
cagattattcaggcgattcaagatgaaatggtttctgccgaaattgaatttaacaaaatt
tctgatgccaatgtgatccctcttcccattacaaagtatctggaaacattacctagggaa
aatattgatgccttggatggcaagaatttttccagtgaagcaatgaaatgttgcatgaga
gacctataccattatgcacgaatatctggaaaacatattcttgaatgtattatggacaca
gctttatctgcaatcaagagggagcaacttgaagttgctagtcatgttctatcattgttc
cctcttcttcagccacttgtagctgtcctaggttgggatttactttcaggtaagacaaca
ctacgcagaaggctaatgcaattgctttggacaagtaaatctcaggtgctaaggctggaa
caattctctctttacaagaagcaatctgatgagatactgtgtgtggaatatctttgtgat
gtgttatgttttcacatggatattgcacactttgttgcatgtgtcaactccggtttgtct
tggaactcaaaaaattcactactcttttctcaaaaagataagattagaaatgaacacgag
aatgaggttttagacccttttgttgagaacatgatacttgaaagattagctgttcaatca
cccatgaaggttttatttgatgctgtccctgggataaagtttcaggaagcatttgacatt
cttaatatgcagcccatagcttcaacatctgcagcatggaaaaggatgcaggacattgag
cttgtgcacatgttatatgttcttgaatcagctgtttttgctcttggaaccatggagagg
tgcatcaacaatgatatgaactcccaacttcatgtagctatgtcttacttgaagaatatt
caaacacacatggaggccataagaaacatttctcgcagaatctttatggttagcattata
atatctctgctctatttggatgaaatgtccatcaacatcacagatgctaccttggttgaa
agttattctgaacttccgcaaaatactgtcaagaaatcatcctttgatgaagaaaataaa
aacataatctcttttatgggattactactagatatattgcggcgaaatctgccttcaaca
atcaatgaagtaggaaatatgttggacagttctgtggaaattgcagcaaaacaagttctg
gaatggaggactgctaaatcttctaagtttattgaagattgggaatggcgtttaactatt
ttggatcatcttctacccgtatctgaattccaatggacttggaaagaggcattagttatt
tttcgtgctgctccttccaaattattaaatctttgcatgcaaagggcaaaatatgatata
ggggaagaggctgtgcgacgattctccctgcctcctgaagataaagctgttcttgaactc
tcagaatgggttgctgcttcttttagaagagcatcaattgagaatgcagtatctcatgtt
gcagagggaagagcaaatgcactacagaaattggacctttcatcattacaaagccagcta
ggttctttagctgcgattcttctttgcattgatgtttcagcaacttctgcaaagtctgta
gatatgtgcaagttacttctcgaccaggctatgagtgtgctagctgtgatctttcctgga
agctcgccaaagccaggtccttcttattgggagcagatacaagaagttgccactatatca
gtaacaaggcacatccttcaacatctgtatgatctgttggagcaagagaagtctttgacc
ctccaagaaatactttctgaagagagaatgatatttcctgtaaatgagcctagcaagaaa
ggaaaaaggcaaagagccattgttatcttacatcagatgattgacgatgctcatcaagga
aagaggcaattcttaagtggtaagctccataatctttcaaaagctcttgctgtcgaagaa
acagagaataacaataataatgaagaaggttcaaattccatcaaaatggctcactctaac
aagggcacaattgttggacttggcttgagagctccaaaatcatcctcattgaatccatca
agcactgaaagtatttctgagattacttatgaattgaaagacaccggaaaaaggcttttt
ggtcctgtaacatccaagccatctacttatctttcatcctttataatctatattgctaca
atcggtgacatagttgatggagttgacacaactcatgatttcaattttttttcactcata
tatgagttgcccaaagatcttcttactcgtcttgtctttgatcgtgggagtactgatgct
gctggaaagatagctgatattatgggtgtggattttgtgcacgaggttatattggcttgt
gtgccaccagtttttcctccacgttctggtcatggctgggcttgcattcctatcctacct
actctttctggaatgagtatgggtcgaaagatctccctcaaagctagcacttctggttca
ctagaaaaacatggaaaacctctctatcccctccagttgagtttagtaaagcatcttgcg
aagctctcaccagtaagggcagttctggcatgtgtatttggtagtaccatattatctagc
agaaatgaatcatctgattcttccatacattccaaaggccaatttttacaaggacctgat
actgagaggttattctatgagtttgctcttgatcagtcagagaggtttccgacactcaaa
cgctggatacagcagcaatcaaaccttcataaaatctcaacaacaacaataacatctaaa
agtgacaacaatgttgcagctatacctaacggcaaagcttcaaggaaacgagtttgtgaa
cctgagagtgacactgaatcagaagtagaagagatggtcattggtgggcataatagtcca
tctttttctgagttcactacccataatacaattgctaaatgtgcacaccgttctgcaatg
cttgatgattttggggttgatcctgcaagctatgtttcatttgactgggagaatgaaggg
ccttatggaaaagctgttgaaagattgattgatgaagggaaactgctggatgctcttgca
ctatctgatcgatgtttacgtgatggagcatctgactatttactccagttgttgattgaa
caagaggaagcaagtaatctggttctcccacagcctcatggctatgtgatgccaaatttt
ggtagcaccagttggcagtattgcttgcggctcaaggacaaactgcttgcagcaaggctt
gcattaaaatacgtacatcggtgggatctagatcctgcaattgatgttctcactatgtgt
atttgccacttacctcaacatgaaccaattcggagtgaggtactgcatatgagacaatct
ttgcagagataccatcacatcttaagtgctgatgatcattataccagatggcaacaagta
gaggttgattgtaaggaagatcctgaaggattagcattaaggttggctggtaaaggggct
gtttctgctgctttggaagtcgctgaaagtgcatctctgccaattgagttgcgtagagaa
ttgcaaggccggcaattagtaaagctattaaccacagacccccttagtggtggggggcca
gcacaggcttcacggtttctgtcgtccttgcatgactcagatgatgccctacctgttgct
attgaagctatgcagcttttacccgacttacgctctaaacaacttctcgtgcactttttt
ctaaagcgaagagttggaaatctttcagatgttgaagttgccaaacttaacttgtgggca
ctaggtcttcgtgttttgtccttactgccattgccaacccagcaacgatgttcatctttg
catgaacatcctcatctgattctggaagttctgttgatgatgaaacagctgcagtcagct
tcacttatactaaaagaatttccttcattgagggatgacaatctaatacttacatatgct
gctaaagcaatcactattaatgttagcgctgctcctagggaacctcgtatctccatttct
gggtctagattgaagcataaagttaagattggcacaccatcaaggccaaacattgcaagc
agtattggtaattggcaaagagaggctcgctgggctttttcatgggccacttgggattcc
tcacccaaggtttttcaaaaagatgctcatcgtaaaagaaagatttcagggtttatgcat
tctgacacagttgctggggagggaatccctggtattgaagaggagcgacccacatcattc
tctgcagatggccaagaaaggcttccatttgtttccattgctgaagaatgggttctcaca
ggtgatcaaaataaggataatgctgttcgcacctctcatagatatgaaacttctcctgat
tttacactttttaaagcattgctttctctgtgctctaatgatatgacctcttccagaggg
gccctgcaattgtgtgttgctcagatgaaagatattttgagcgcccaaaatctgcctttg
aatgcttctatggaaactataagtaaagcatatcatgcaacagaaacttatgcgcaggcc
ttgggttatgcaaaaagcttgttgaaaaaacttgctgcatcaagtgaatatccaaataac
tatgataaatacagggacgtagatgattcatctacagaaactagcagctcaagtagtggt
agccagtaccccgatgacctttctgaacttcttgcacaagcacatacctggttagggcat
gcagaagttcttcagagccttcttggatctggaatagttgcttctattgatgatattgct
gataaagaatcttcagcctgcctccgtgacagattaatcctaaatgaacgatacagcatg
gcagtatatacgtgtagaaagtgtaagattgatgctttgcctgtatggaatgcttggggt
catgccttgattaggatggaacactattctgaagctcgtgtgaagttcaagcaagctatt
caactgcataagggtgatccttcttctgttatccttgggatcatcaatattgtagaagga
ggtcctcctgttgatgttccatctagtcggtctatgtatgaacacttggcaaaaagtgca
tcaacaatcttggatgattctctttctgcagattcatacctcaatattttacacatgcca
tcgacatttccccgttctcaagaattgtctaatggccgcctatcttttttcccttccaat
tttgaagatggaccttgcagtaacctggacagcattaggtatgctgagtgcatgtactat
ctacaagaatatgctcgtcaagaaactctagcatttatgttcaagcatggtcgctactta
gatgcttgtctgctgttctttccaccaaattcttcacctctttctcaatcttcacaatat
ccagcaccatctcctgcctcatctcctcaaagagctgatcctttggcaactgactatgga
accattgatgatttatgtgaattgtgcgttggttatggagctatggatgttttacataat
attgtcttagaaagatcatctgtgtcgccagaagatgcgacattgagccagtacatggct
gctgcactcactagaatatgcagctattgtgaaacacatcggcattttaattgtctctac
aagtttctggttatccagggtgaccatattgctgctggtctatgctgtattcaattgtgc
atcaactctttttcacaggaagaggcaataaagcatttggagcgtgcaaagattcatttc
gatgaaggattatcagcccgacatagagcatcaagtgagacctccagattattgtccaag
tctattaggggaaaaagtgcctcggaaaaattgagtgtcgagggggttgtaaaattctca
gccagtgtatctatccagatagatgtagtaaagtccctcaatgattcagatggtccccag
tggaagcattccctttttggaaatccaagtgaacctgaaaccttcaagagaagatgccgt
gtagctgaggcccttgccgaaaagcattttgacttggcttttcgggttatttatgaattt
gaactccctgccgtggacatttatgctggtgtggcagcatctcttgccgagagaaagaaa
ggtggtcagctaacagagcttttcaagaacataaagggtaccatagatgacgacgattgg
gaccaggttcttggcactgccattaatgtatatgctaacaagcacagagagcggccggat
cgtctcatagacatgctaattagcagccacaggaaagtgttggcctgcgttgtttgtggt
cgcctaaagagtgccttccagatagcatcaagaagtggaagtattgccgatgtcgaatat
gttgcccatcaggcatcagttgcaaatgcattgccagttgttgacatgtgcagacagtgg
ttgactaagtacaaatttggcatctga
DBGET
integrated database retrieval system
