Zingiber officinale (ginger): 122026908
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Entry
122026908 CDS
T08725
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122026908
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122026908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
122026908
NCBI-ProteinID:
XP_042441573
LinkDB
All DBs
Position
10A:54031792..54075748
Genome browser
AA seq
981 aa
AA seq
DB search
MITEKPSWVRHEGMQIFSIDIQAGGLRFATGGGDHKVRIWNMKSLEGGSENDSSTPKVLA
TLRDHFGSVNCVRWAKHGRLLASGSDDQVILIHEKKPGSGTTEFGSGEPPDVENWKVTMT
LRGHTADVVDLNWSPDDSTLASGSLDNTIHIWSVTTGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKTEGHWSKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRKQFSNSQEANSAPAGWTNGSSKAAS
RELQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYALFACSLDGT
VASFHFEVKELGHRLNDTELDEIKRSRYGDVRGRQSNLAESAAQLVLEAVSAKQTASKKV
ASTVEKNQISGKASTDPVNPIISQPIHKSTDAQTGDGRKNGGAINDGSNTITSAQLSSPP
KQREYRRPDGRKRIIPEAVGVPAHQENQSAVHAQLAEFSPLALDQTKDNRNVVADGGVKD
ASLKRPFSGSYETHSYSDKLNNCGSKERSGITARANITESLLIEKTPVLTSTDGRANVEH
IGCIGMPSFLSTCNSLSIRVFNKKNTEDSLPICLEAKPVEHSAHDMIGVGNAFSTKETEI
SCTQGSETLWSDRISGKVTVLAGNANFWAVGCDDGCLQIYTKCGRRAMPVMMMGSAAVFV
DCDEAWKLLLVTKRGLLYVWDLFNRTCILHESLASLVTAREESSTKDAGTIRVISARFSR
SGSPLVVLATRHAFLFDMSMLCWLRIADDCFPASNFASTFNLSSIQSGELGKLQVDVGKF
LARKPSWTRVTDDGTQTRAHLETQLASSLALKSPNEYRQCLLSYVRFLAREADESRLREV
CESFLGPPTGMAESTPTDPKNPAWDPYVLGMKKHKLLREDILPAIASNRKVQRLLNEFMD
LLTEYETSEAHTDTMDIAPQT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggagaagcctagctgggttagacatgaggggatgcagatcttctccattgat
atccaagccggcggtctcaggtttgcaactggtggaggtgatcacaaggttcgaatatgg
aacatgaaatcactagaggggggctctgaaaatgattcttcaactcctaaagtgctggct
acactgcgggaccactttggatcagttaattgtgtcaggtgggctaagcatggtaggctc
cttgcttctggatctgatgatcaggtaattcttattcatgagaaaaagcctggatctggt
acaactgaatttggcagcggagagcctccagatgtagaaaattggaaagttactatgaca
ttgagaggccatactgcagatgtggtagatctcaattggtctcctgatgactcaacacta
gctagtggtagcttggataatactattcacatttggagcgttaccactggcatctgcact
gctgtactaagagggcattccagcttagtcaaaggagttacttgggatcctattggttct
ttcatagctagtcagtcagatgacaaaactgtaataatatggagaactagtgattggagc
ttggcacataagacagaaggccactggtcaaagtcgcttggttctacatttttcaggcgc
cttgggtggtcaccgtgtggccatttcatcactactactcatggctttcagaaacctaga
cattcagcccctgttcttgaaagaggtgaatggtctgctacctttgatttcctgggtcat
aacgctcctgttattgtggtaaagtttaaccattccatgttccggaaacaattttctaat
tcccaagaagcaaactctgcacctgctggatggaccaatggatcttctaaggctgcatca
agagagctccaaccatataacgttattgcaattggaagtcaggaccgtactataacagtg
tggacgacggcaagtgcccgccccttatttgttgctaaacacttctttacacaaagtgtt
gttgacttatcatggagcccagatggctatgctcttttcgcttgctctttggatggcaca
gtagcctcctttcattttgaggtgaaggagctaggacacaggttaaatgatactgagctg
gatgaaataaagagaagtcggtatggagatgtcagaggaaggcaatcaaacttagcagaa
agtgctgcacagttagtgctagaagcagtctcagctaagcaaacagcaagcaaaaaagta
gcatctactgttgagaaaaatcagatatctggaaaagcttccactgatccagtaaatcca
attattagccaaccaattcacaagagtactgatgcccagactggagatggtagaaaaaat
ggaggggctataaacgatggttcaaatactattacatctgcgcagttatcaagtcctcca
aaacaaagagagtatcgccgtcctgatggccgaaaacgaattataccagaagcagttgga
gttccagcacaccaggaaaatcagtctgcagttcatgctcaacttgcagaattctctccc
ttggccttggatcaaacaaaggacaatcgaaatgtagttgctgatggtggggtaaaagat
gcttccctaaagcgtccatttagtggaagctatgagacacacagctattctgacaagctt
aacaactgtggatctaaggagcgttctggaatcactgcaagagctaacatcactgaaagt
cttcttatcgagaaaacaccagttctgactagcactgatggaagggctaatgtagaacat
atagggtgtataggcatgccaagttttctatcaacctgcaattctctttcaattcgagta
tttaataagaaaaatactgaagacagtttaccaatctgcctggaagcaaagcctgttgag
cattctgcccatgacatgattggtgttggtaatgcattttccactaaagaaactgaaata
agttgcacacaaggatctgaaactctgtggtctgatcgcatatctggaaaagtcactgtt
ttagctggaaatgccaatttttgggctgttggttgtgatgatggttgcctacagatctac
actaaatgtggaaggcgagccatgccagtcatgatgatgggatctgctgcagtttttgta
gattgtgatgaggcttggaagttgcttcttgtcacaaaaagaggtttgctgtatgtttgg
gatctttttaacaggacttgcattttgcacgagtctttagcttctctagttacagcaagg
gaggagtcttcaacaaaagatgccggtaccatacgagttatttctgcaagattctccaga
tcagggtcacctctggttgttcttgccacccgtcatgcctttctgtttgacatgagcatg
ctgtgctggctaaggatagctgatgattgctttccagcttcaaattttgcaagtaccttt
aacttgagttctattcaaagcggtgaactggggaagttgcaggttgatgttggcaaattc
ttggcaagaaagccaagctggacaagggtgacagatgatgggacacagacacgagcacat
ttggagacacagcttgcttcatctcttgctctcaagtcccctaatgaatatcgccaatgc
cttttatcttacgttagatttcttgcaagagaagcagatgagtctcgtcttcgagaagtt
tgtgaaagttttcttggtcctcccacaggaatggcagagtctacgcctacagacccaaag
aatccagcatgggatccttatgtgctaggaatgaaaaagcacaaactcctcagggaagat
attcttccggctattgcttcaaacaggaaggtccaaaggctgctaaatgagttcatggac
ctactcactgaatatgaaactagtgaagctcatacagatactatggatattgctccacaa
acgtaa
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