Zingiber officinale (ginger): 122026945
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Entry
122026945 CDS
T08725
Name
(RefSeq) testis-expressed protein 10-like isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122026945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122026945
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122026945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
BP28CT
MSMEG_3727_PQQ-assoc
Motif
Other DBs
NCBI-GeneID:
122026945
NCBI-ProteinID:
XP_042441638
LinkDB
All DBs
Position
10A:complement(88194545..88227691)
Genome browser
AA seq
878 aa
AA seq
DB search
MVRAKPASSKKQKRGVDFKKIRHKIGRKLPPPKNATIVQIKSKAIVLPQQSIASEKEGLA
VNKKGLTLRELLQQTSHHNAKIRRAALFGIKDLILKYPLELKLHKHAIIEILRVRICDND
KMVRNTLYHLLKSVIFPSSKEDITAPVISLLMAYIFNAMTLMTVDIRLMAFKFFKLLALN
YPSSFMLYAEKVLDNYIDILRNNQIYLVEKNKLINVLAGLAHCLSLIANKGQRDDRLNNQ
NQEKFQRRVLHAYKLEVHEDHAGIDSLYVKLEELVPVLINCFLESISTTCTMDVIDARSF
NCMLSTLKCIYLAVKFLGIEKLTTSVFDGRDVGQKNFNLYYNKLWETFPVHQLFQSAEKD
DDKYIILDIKIAEICLCLTKWVNGIDFLSDKLVEFIEYLLLVGTNTWEKGTHMENHIVSL
LPFIPRLLSQITANGKTRLLEAFTCSFKECRVDSRLFTAYLSVVEELLLVTINTGLQMHA
SSYQDHLSHEIAWMRELPRILLHLSDEHPSNTMVVLKVLLRIGQCFVPNSPLGFEYDALQ
FLLREFYAIRSHSGSINYGPFLKLPNDCKELALCCLCYFSWLTSDFLESLAYCCLCNDME
PLILLRIVEVLQTAYMSGRVPVSEYMSFLVTLVARFRVSPERFLAKIFEEDSNQKTFKSI
TDAVFECLDQIGDSCIVLKLLFKNMLNEMLLNPPMDNFRGMLRMIIALDARLTKLSDEDI
GDLSKILCRYMVDTASSMSEDPDVACRFSGIPTFDFCLKPCIVLLIASGNVLPSVLKLLN
QFISEDCILLPSESDDKYGMDISSRINAVSRILSFMFSHKRLHINLSRNKAHIDHTLLIM
HNLLDSNKHNISYEERGRLQSGLDKMKGSICDLWIKNS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggccaagccagcctcttccaagaaacaaaaacgtggagtggatttcaaaaaa
ataaggcataagattggacgaaagttgccaccgccaaagaatgcgaccattgtgcagatt
aaatctaaagccattgtgcttcctcagcagagtattgcatcagagaaagaagggcttgct
gtgaacaagaaaggcctgacactaagagagctccttcagcagacatcccaccacaatgct
aagataaggagagctgcactttttggtataaaggacctcattctaaagtatccattggag
cttaaacttcacaagcatgccattatagagatacttcgtgtacgtatatgtgacaatgac
aagatggtccgtaacacattatatcacctcttaaaaagtgtcatatttccttcatcaaaa
gaggatataacagcacctgtaatctctttactaatggcttacatctttaatgcgatgaca
cttatgacagttgacattaggctaatggctttcaagttttttaaacttcttgccttgaac
tatccatcttccttcatgttgtatgctgaaaaggttcttgataattacattgatatcctc
agaaacaaccaaatatacctagttgagaagaacaagctcatcaatgttcttgctgggctt
gctcactgcctatctttgatagctaacaaaggtcaacgtgatgatagattgaacaatcag
aatcaggaaaaatttcagcgaagagttttacatgcctacaagctagaggtacatgaagat
catgctggaattgattctttgtacgtgaaacttgaagaacttgttccagtacttataaat
tgttttttggagtcgatttcaacaacttgtacaatggatgtaattgatgctcgatcattt
aattgcatgttgtctacacttaagtgtatatacctggctgttaaatttcttgggatagag
aagcttaccacttcagtgtttgatggacgtgatgttggacagaaaaattttaatttatat
tataacaaactttgggaaacatttcctgtccaccagctttttcaatcagcagaaaaggat
gatgataaatatataattcttgatatcaagatcgctgagatatgtttgtgcctaactaaa
tgggtgaatggtattgattttctgagtgacaagcttgttgagttcatcgagtatttgttg
ctggttggcacaaacacatgggaaaaagggacacatatggaaaaccacattgtttccctc
ttaccatttataccaagacttctttcacagattactgccaatgggaagactaggcttctt
gaggcctttacttgttctttcaaggaatgcagggtcgattctaggctatttacagcatat
ttgtctgtagttgaagaattattgcttgttacaatcaatactggcctgcagatgcatgca
tctagttatcaagatcatctaagccatgagattgcttggatgagagagcttcccaggata
ttactgcacctatctgatgaacatccctctaacacgatggtggttttaaaagtcctactt
cgaatcggacaatgttttgtgccaaattcacctcttggttttgagtatgatgctctgcaa
tttctcttgcgagaattttatgctattagatctcattcaggatcaataaattatggcccg
tttctgaagctaccaaatgattgcaaggaacttgccctttgttgcttatgctacttttca
tggctgacttcagattttcttgaatcattagcctattgctgcttatgtaatgatatggaa
ccactcatactgctaagaattgttgaggttctgcagacagcatatatgtctggtcgtgtg
cctgtttctgagtacatgagtttcttggtaactttagttgcacgctttagagtatctcct
gaaaggtttcttgccaaaatttttgaggaagattcaaatcagaaaaccttcaagtccatc
acagatgcagtatttgaatgccttgatcagatcggtgacagttgcattgtcctgaagttg
cttttcaagaacatgttaaatgagatgttactaaatcctcctatggacaatttccgtggt
atgctcagaatgatcattgcacttgatgccaggctaactaaactttcagatgaggatatc
ggcgacttaagcaaaatcctttgtcgatatatggttgatacagcatcatctatgtctgaa
gatcctgatgtggcttgtcggttcagtgggatccctacatttgatttttgtctgaagccc
tgcattgttctgttgattgcaagcggcaacgtcttaccttctgtgttgaagttactcaat
cagttcatttcagaagattgtatattgcttccttctgaatctgatgataaatatggaatg
gatatctcgagtagaataaatgcagtgtcacgcatcctcagctttatgtttagtcataag
agacttcacataaatctttcaagaaataaagcacacattgatcatactcttctgatcatg
cataacttattggattcaaataagcataacatttcatatgaagaaagaggcagattacag
agtggtcttgataaaatgaagggtagcatatgtgatttgtggataaaaaattcatga
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