Zingiber officinale (ginger): 122026975
Help
Entry
122026975 CDS
T08725
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122026975
09122 Translation
03015 mRNA surveillance pathway
122026975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122026975
Spliceosome [BR:
zof03041
]
Complex A
Other components
Complex A specific factors
122026975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
122026975
NCBI-ProteinID:
XP_042441676
LinkDB
All DBs
Position
10A:complement(39286622..39295671)
Genome browser
AA seq
479 aa
AA seq
DB search
MSGSYGSGGPDDASQPPRGGGYGRGRGGGGGGYNGSQGNRGGGGGYDGGGYQGGDRGNRG
GGGGHRGGGRGGGVGREGDWRCPNSSCGNLNFARRVECNKCGAPCPGGGVGGGGRGGGYG
DSNRGDGGYGDSNRGGDGGNGYNRGGGNYNDGRGGGRDGYNSRGGGYSGARGGRSDYEGR
SADLEGRGGDYGGRGGSFNDNSREREDGGYGQVVPPPSAGYGGPGGAVGNYPTNPYGANN
AYTIDSVTPPSSYGGPNSYPPSYGAPPPNAYPNEGSLGRGGPPSSYGPPTSGYGDRGNRG
RAGGGAPPRHGGGAYGAAPTDATGPIKQCDESCGESCDNSRIYISNLPPDVTTDELRDLF
GGIGQVGRIKQKRGYKDQWPWNIKIYTDESGNNKGDAVLSYEDPAAAHSAGGFYNNYDMR
GYKINVGMAEKTAPKAPPSYGHGSGGRGGYGGGDRRRDNHYDGGGPDRHHYSGQRSRPY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttcctacggctcaggcggacccgatgacgcttcgcagcctcctcgcggcggc
ggttacggacgaggtcgaggaggcggcggcggcgggtacaatggaagccaggggaatcga
ggtggaggtggcgggtacgatggaggtggatatcaaggtggagatcgtggaaaccgggga
ggtggaggtggccacagaggtggtggtcgtggtggtggagttggtcgggagggggattgg
cgctgccctaactcaagttgcggaaatctgaacttcgcacgaagagtggaatgcaacaaa
tgtggagctccgtgtcctggcggcggcgttggtggtggtggacgtggtggtggttatggt
gatagtaacagaggtgatggtggttatggtgacagtaacagaggaggtgatggtggcaat
ggttacaatagaggtggtggtaattataatgatggtcgaggtggtggccgtgacggttat
aacagtcgaggtggtggatattctggggctcgtggtggtcgaagtgattatgaaggaaga
agtgcagatttggagggaagaggtggtgactatggtggaagaggtggttcttttaatgac
aatagtcgagaaagggaggatggtggttatggtcaagttgtgccacctccttcagctggc
tatggtggtcctggcggtgctgttggaaattaccctactaatccttatggtgcaaataat
gcttatactattgattctgttacacctcctagcagttatggtggccccaattcctatcct
ccttcgtacggtgcaccccctccaaatgcatatcctaatgaaggttctttgggtcgtggt
ggtccaccatctagctatggccctccaacatccggatatggtgaccgtggtaaccgtggt
cgtgctggtggtggtgctcctcctcgccacgggggtggtgcatatggtgctgctcctact
gatgctactggtccgatcaaacaatgtgatgaaagttgtggagaatcttgtgataactca
aggatctatatctcaaacttgcctcctgatgtgactacagatgagctacgtgaccttttt
ggagggattgggcaggttggcaggatcaagcaaaaacgaggctacaaagatcagtggcct
tggaatataaagatatatacagatgaatctggaaacaacaaaggagatgctgtactctca
tatgaagatcctgctgctgcacattctgctggaggcttctataataactatgacatgaga
ggatacaagattaatgttggaatggcagagaagactgcacccaaagcacccccttcatat
ggccatggcagtggtggcagagggggctatggtggaggagataggcgcagagacaatcat
tatgatggtggcggacccgataggcatcattacagcggccagcgatctcgaccatattag
DBGET
integrated database retrieval system
