Zingiber officinale (ginger): 122026988
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Entry
122026988 CDS
T08725
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122026988
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122026988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122026988
NCBI-ProteinID:
XP_042441697
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All DBs
Position
10A:complement(53071844..53074942)
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AA seq
560 aa
AA seq
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MAAASSSVPFFGMREEEQYNIQKQQPQQMLSATPSSSAAPAAAPPKKKRNLPGNPNPDAE
VIALSPKALMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEVRRRVYICPE
TTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRC
DCGTLFSRRDSFITHRAFCDALAQESARLPATMGGHFYGRSPAGLMNLGLPPVNSPHFSS
LQGHQTTTPTSNDLLRLSGNNGADAMQFDHLPSFRPAAGGTFFLGGGSSQSVNEVVNSHL
LQPKPFHGLMQLQDHHANMSSSSAAIDLFNLNIFSNNGNANGTTSNAAMNQFPGQFNNPA
AGGSGNETTYAGNLMSHHLDANMYGNETALHPHMSATALLQKAAQMGATSSNSGGANSIL
RGFGNLAKNNPGAGFDGVGENSGGPPQAQNEAHFNELFMNSLGNGNGAINDQEAAAGFGV
FSTGIGSNINDNKLQRNQLAMLGAAAAADKLTRDFLGVGGRMRSMGGGVPPRELHLGIDM
ATLDSELKSTRSFVGGGRMQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcttcatcgtcggtcccttttttcggtatgagagaagaagaacagtataac
atccaaaagcagcagccacaacagatgttatcagcaacaccaagctcatcagctgcacca
gctgcagctcctccaaagaaaaagaggaacctccctggaaacccaaatcctgacgctgag
gtgatcgctctatcgcccaaggcactcatggcgacgaatcggttcatatgcgaggtgtgc
aacaaggggttccagcgggagcagaacctgcagttgcaccggcgaggccacaacctgccg
tggaagctgaagcagaagaacccgaaggaggtgcgccgccgggtgtacatctgcccggag
accacgtgtgtccaccacgacccttcccgcgccctgggcgacctcaccggcatcaagaag
cacttctgccggaagcacggggagaagaagtggaagtgcgacaagtgctccaagcgctac
gccgtgcagtccgactggaaggctcactccaagacctgcggcacccgcgagtaccgctgc
gactgcggcaccctcttctccaggcgtgatagcttcatcacccaccgagcattctgcgac
gcattggcacaagagagcgcaaggctcccggcgacgatgggtgggcatttctacggccgc
agccctgccggacttatgaatttggggcttcctccggtgaactctcctcatttctcctct
ttgcaaggccaccagacgacgacgccgacttccaacgatcttcttcggcttagtgggaat
aatggcgccgacgcgatgcagttcgatcacttgccatctttccggcctgcggccggagga
acgttcttcctcggcggcggttcgagccaaagcgttaacgaagttgtcaattctcatctg
ctccaacccaaaccctttcatggcttgatgcaactccaagaccaccacgctaacatgtcg
tcgtcttccgctgcgattgatctcttcaatctcaacatcttttccaacaatggaaacgcg
aacggcaccaccagcaacgccgccatgaaccaattccccggccaattcaacaatccagca
gccggcgggagcggcaacgagacaacgtacgccggaaacctcatgagccatcacctcgat
gcgaacatgtacggcaacgagaccgccctccaccctcacatgtcggcaactgcgctactc
cagaaggcggcgcaaatgggcgcaaccagcagcaattctggcggcgccaactccattctc
aggggattcggaaacttggcgaagaataatccgggagcaggcttcgacggtgtcggagag
aactccggcgggcctcctcaggcgcagaacgaagcccacttcaacgaactattcatgaat
tctctcggcaatggcaatggagctatcaatgatcaagaagctgcagccggatttggggtg
ttcagcaccggaatcggttcgaacatcaacgacaacaagttgcagagaaaccagttggca
atgctcggcgccgccgcagccgccgacaagttaaccagagacttcctcggggtaggcggt
aggatgaggagcatggggggcggcgtgccgccaagagagctgcatcttggcatcgacatg
gccaccctggattccgaactcaaatccactcgatcattcgttggcggcggccgcatgcag
tag
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