Zingiber officinale (ginger): 122027005
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Entry
122027005 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122027005
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122027005
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122027005
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
122027005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
122027005
NCBI-ProteinID:
XP_042441730
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All DBs
Position
10A:complement(28579432..28589711)
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AA seq
490 aa
AA seq
DB search
MVRLPYVTALTTLFSYGLLFAFGQLRDFFRKIIDWFKSTSKDLKGYAPICLGLEDFYTRR
LYLRIQDCFSRPIASAPDAWFDVVERYSKDNNKTLHRTSKTSKCLNLGSYNYLGFAAADE
YCTPRVIESLKKYSPSTCSIRVDGGTTDLHMELEFLVARFVGKPAAITFGMGYVTNSAII
PVLIGKGGLIISDSLNHNSIVNGARGSGAAVRVFQHNNAPHLEEVLREQIAEGQPRTHRP
WKKIIVIVEGIYSMEGELCQLPEIIAVCKKYKVYTYLDEAHSIGAVGKSGKGVCELLGVD
PADVDIMMGTFTKSFGSCGGYIAASKEIVQYLKHACPAQLYATSMSPPAVQQVISALKVI
LGEDGSSRGAQKLAQIRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRDC
LKQNVAVVTVAFPATPLLLARARICISAAHSREDLLKGLEVISKVGDLVGIKYFPAEPPK
HGHQAHKKVE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtgagattgccttatgtcacagcgctcacaacgcttttcagctatggcctcctcttc
gcgttcggccagcttagggattttttccggaagatcatcgattggttcaaatccacctcc
aaggacctcaaggggtatgcaccgatctgcttaggtctagaggatttttacacccgccgc
ctctatctccgcattcaggattgctttagtcgaccaattgcaagtgcaccagatgcgtgg
tttgatgtggttgaacgctactctaaagacaataacaaaacactgcaccggacctcaaag
acttccaagtgccttaatctgggatcatataactaccttggttttgcagctgctgatgaa
tactgcacgccccgtgtaattgaatctttaaagaaatattctcccagcacctgcagtatc
cgtgttgatggtggcacaactgacttgcacatggagctggagttcctagttgcaaggttt
gtgggaaaaccagctgctataacttttggcatgggctacgtgacaaactctgccattatt
ccagttctgatagggaagggaggactcatcattagtgattctctgaatcataattcaatt
gtaaatggtgctcgaggatctggtgcggcagttcgggttttccagcacaataatgctcca
cacttggaagaggtactgagagaacagatagccgagggacaacctcgaactcacaggccc
tggaagaagattattgtcattgttgagggtatatacagcatggaaggagaactttgtcag
cttccagagattatagctgtttgcaagaaatataaggtatatacctacttggacgaggcc
cacagcattggtgctgttgggaaatctggcaaaggagtttgtgagctcctaggagtggat
ccggctgatgtcgacatcatgatgggcacatttacaaaatcctttggatcttgtggagga
tatattgcagcatccaaggaaattgttcaatacctaaagcatgcatgtccagcacaactt
tatgcaacttcaatgtccccaccagctgtgcagcaagttatatccgcacttaaagttatt
ctcggagaagacggatcaagtagaggggcccaaaaactagcacagattcgtgaaaatagc
aatttctttcgctctgaacttaagaagatggggtttgaagttcttggtgataatgactcc
cctgttatgccaataatgctttacaacccagcaaagattccagctttttctagggattgt
ctcaaacagaatgttgctgttgtcactgttgcttttccagccacacctcttctgcttgca
agggctcgaatttgcatatcggccgcacactcaagggaggacctccttaaagggctggag
gttatcagcaaggttggtgatcttgtgggcatcaagtactttcctgcggaaccacctaaa
catgggcatcaagctcacaagaaggtggagtaa
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