Zingiber officinale (ginger): 122027016
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Entry
122027016 CDS
T08725
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase 2-like isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122027016
Transfer RNA biogenesis [BR:
zof03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
122027016
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
Ig-like_IP5PC_F
TrkA_N
Motif
Other DBs
NCBI-GeneID:
122027016
NCBI-ProteinID:
XP_042441745
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Position
10A:78407286..78477904
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AA seq
466 aa
AA seq
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MAERSKQWLLIATGTLLGSFCTLALLRFLSRKEEKQNGRSSSQFNPQNGMIDNKKKLAGC
RTSCQDSLKNLHGLDLEDEVVSEQLTRNIQFFGFEFQRKVSDAYVVVVGLGGVGSHAASM
LLRSGIGRLLLVDFDQVSLSSLNRHAVANRDDVGTPKALCLQKHFASIFPESNVEVKVQM
YDTSSEEEILSGYPDFVLDCIDNIDTKVALLAACVRRGLKVLSAMGAGARADPTRIRVAD
LRESINDPLSRAVRYRLRKDHGIDGGIPVVFSLEKPKMKLLPFKSLTEEEENPSDYQVVP
GFRVRIIPVLGTIPAIFGQIMASYVVTLLSGLSVEMEPVVNLDLDHYGILHNRLVEHEES
VYGSSIEVLVDVEEVMYVVKELWHGRSARDQSLINVGRKMWRSVNELMLVRWDKSKPATV
TNLILLKLNEVNAHESSTIDLIKEKEPEFYSLVTCVLNRAKIDFGL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagatcgaagcagtggcttctgattgcaacgggcaccctccttggctccttc
tgcaccttagcgcttcttagatttctttctagaaaggaggagaagcagaatggtcgatct
tcttcccaatttaacccacaaaatggcatgatcgataataaaaaaaagcttgcaggatgc
agaactagttgtcaggatagtttaaagaatttgcatggattggatttagaagatgaggta
gtatctgaacaattgacaaggaacatccaattctttggttttgagtttcaaagaaaagta
tcggatgcctatgttgttgttgttggtcttggtggagttggtagtcatgctgcttccatg
cttttacgatctggtattggcaggctccttcttgtggattttgaccaggtgtcactttca
tcactaaatcgtcatgctgtggccaacagagacgatgttggaacccctaaggccctttgt
ctgcagaagcattttgcaagcatattccccgagagtaatgtggaagtaaaagttcagatg
tatgatacatcatctgaggaagaaattctatcaggctacccagactttgttcttgattgc
attgacaatattgacaccaaggttgctctccttgctgcttgtgtgcgtagaggtttgaag
gttctctcagcaatgggtgcgggtgctagagctgatccaacgcgaattcgtgttgctgac
ttgagagaatcaatcaatgacccactgtctcgagcggtcagataccgtttgagaaaagac
catgggattgatggtggaatacctgtggtattttctttggagaaaccaaagatgaagttg
cttccttttaaaagtttaactgaagaagaagaaaatccttcagactatcaggtagtacca
ggtttcagagttcgtattatacctgttctgggtactattccagcaatttttgggcaaata
atggcctcatatgttgtgactctgttatcgggattgtctgttgaaatggaacctgtggtt
aatttggatttggatcattatgggattcttcataaccgccttgttgagcatgaagagtca
gtttatggctcctccattgaagttttggttgatgtcgaagaagttatgtatgtcgtcaaa
gagttgtggcatggaagaagtgcaagggatcaatccttgataaatgttgggcgcaaaatg
tggcggtctgttaatgagttaatgctcgtaaggtgggacaaatcaaaacctgctacagtt
acaaacttgatactcctgaagcttaatgaggtgaacgcacatgaatcaagtacaatagac
ctcataaaggagaaagagcctgaattttattccttggtgacttgcgtgctgaatcgagca
aagatagacttcggtctataa
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