Zingiber officinale (ginger): 122027162
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Entry
122027162 CDS
T08725
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25869
zinc finger protein IDD1/2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122027162
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122027162
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
122027162
NCBI-ProteinID:
XP_042441987
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Position
10A:complement(16729407..16732132)
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AA seq
519 aa
AA seq
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MMEYENTSVRSISNSGSGGASVDAPPSTGQPPQIPVKKKRNLPGTPDPEAEVIALSPKTL
LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTGKEVRKRVYVCPEPSCIHHDPS
RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKVCGTREYRCDCGTIFSRR
DSFITHRAFCDALAEERAKTGTATLTMNAKPDVDDGKVTESIKAKVAVAAALETASAAAV
ETASPLDRRDPEKSTGLLQYVPPPSSTLANTSGAAASSSSATTSSNSGGSSSNNTSMFAN
LFASVSGATAASHCSATFSDLMGAMAGHSDRPLGEPPSLCLATNGGLPSSLFPPHGRSHD
RHTFAPSPASSHMSATALLQKAAQMGAVATGSSFLRGFGLDAPSGQQEISIVRDSTLQWG
HQRQQLLQPEPVPMLSSGLGLGLPYEEDLMMGSSSLYGAKPATLDFLGLGMGPVGGGPNG
ELSALLSSSIGGSRLDIGPGAAVAGGRKVVPKSTSPANP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtatgagaatacctccgtcaggagcatctctaattccggttccggtggagct
agcgtcgatgcgccgccgtcaacggggcagcctccgcagattccggttaagaagaagaga
aacctacccggaacaccagatccggaggcggaggtgatcgcgctctctccgaagacactg
ctggcgacaaatcgatttgtgtgtgagatttgcaacaagggattccagcgggatcaaaac
ctccaactgcaccggagagggcataatttaccatggaaactgcggcagaggacggggaag
gaagtgcggaagagggtttatgtctgcccggaaccgagctgcattcaccacgatccgtcg
agggcgctcggcgatctcaccggcatcaaaaagcacttttgccggaagcacggtgagaag
aagtggaagtgcgataagtgctctaagaagtatgccgtgcagtcggactggaaggcccac
tccaaggtctgcggcacacgcgaataccgctgcgactgcggcaccatcttctcacggaga
gatagcttcataacccacagagccttttgcgacgctctagctgaggaaagagctaaaaca
ggaacagctactctgacgatgaatgcgaaacctgatgtagatgatggaaaggtgacggaa
tctataaaagcaaaagtggcggtggcggcagctctggagacagcttctgcggcagcagtc
gagactgcatcgccgctggatcggcgagatccagagaagtcgaccgggcttctgcaatac
gtgccaccaccttcgtcgacgctggcgaacaccagcggcgcggccgcttcctcctcctct
gccaccaccagcagcaacagtggcggcagcagcagcaacaacaccagcatgttcgcgaac
ctcttcgcctcggtgtccggagccaccgccgcatctcactgcagcgccaccttctcggac
ctgatgggcgccatggccggtcactccgaccgccccctcggggaaccgccttccctttgt
ctggccacaaacggagggcttccctcctccttgttcccgccgcacggtcgatcgcacgac
cggcatacgttcgccccatcgccggcctcctcgcacatgtccgcgacggcattgctgcag
aaggcagctcagatgggcgctgtggcgaccggttcatcctttctcagagggttcggcctc
gacgccccctcggggcagcaggagatcagtatcgtccgtgacagcactctgcagtggggg
caccagcggcagcaactgcttcagccagagccggtgcctatgctgtcttccgggctcggc
ctcggactcccttacgaagaggacttgatgatgggctcttcctctctgtacggggccaag
ccggccacactggatttcctcggacttggaatggggccggttggtggcggtccgaatgga
gaactatcggcgttattgtcttcgtcaattggtggaagccgtctcgatatcggaccagga
gcagctgtcgccggaggacgaaaagttgtgccgaaatctacaagtccagcaaatccgtag
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