Zingiber officinale (ginger): 122027314
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Entry
122027314 CDS
T08725
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122027314
03036 Chromosome and associated proteins [BR:
zof03036
]
122027314
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122027314
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122027314
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122027314
microRNA pathway
RISC loading complex
122027314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
122027314
NCBI-ProteinID:
XP_042442192
LinkDB
All DBs
Position
10A:complement(5402472..5406587)
Genome browser
AA seq
1018 aa
AA seq
DB search
MEEAKDDGKAPSNPMEERKLMELCNPSHHHHRHPLHGASCHNTRRYQAAAAYPALLPLPF
TLPLPLPLPPPLLLHIPPIASLPQGINIPKPKAHIHKALWKEKPVCDGKLEAKVAVLPLS
PEIKVIKPQIDSVLAQKSSQIDEKCMGFDQKSLLDLQALVATKRPDSGGREGSTIHLLAN
HFLVQFDPSQRVYHYDVNISPRPSKEIARMIKRKLVEDNSDVLSGALPVFDGRKNLYSPI
EFQEHKLEFFVSLPIPVTRCLPNQNGSLIGKVKSKLFRVNIRLTSKLSGEDLDKFLKEEK
DCVPLPQDFLHALDVVLRENATENCLQMERSLYSNTMGGAKDIGGGVVGMRGFFQSLRPT
KQGLALNVDFCVTAFHESIGVIPYLQKRCDFLRDLSQKKTRGLIGEEKNEVEKALKNIRV
FVCHRETDQRYRVYGLTDEVTENLKFRDRDGKYLMLVDYFRDQYNHDIQFRNLPCLQISK
SKPCYLPMELCMVCEGQKFLGKLSDEQATRILKMGCQRPCERKEIINNVMGGRAGPTSGH
YADQFQLQVSREMTQLCGRILEPPKLKLGDGGLVRDVTPSRYDRQWNFLDSHVAEGCHIT
RWAVVSFGGTPEQRSCIPKFINQLSYRCEQLGIFLNKKTVISPIFEQMQVLNNVPVLESK
LRKIHDASGNLQLLICIMEKKHKGYADLKRISETVIGVISQCCLYSNLTKLTSQFLANLS
LKINAKLGGCNVALYNTLPCQIPTIFSEDNPSIFMGADVTHPHPLDDVSPSVAAVVGSMN
WPAANKYTSRMRSQTHRQEIIEDLADMVGELIEEFFLSGNKLPSRIIFFRDGVSETMFHK
VLKEELRAIWVACLRFLNYKPTITFIVVQKRHHTRLFFNEKKASTGHFFDENIPPGTVVD
TVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENQFKSDEVQKLIHNLCYTFVRCTKPV
SLAPPVYYAHLAAYRGRLYLDRSDSTAFTRQTLSRAGPLPTVPLPKLRDNVKKLMFYC
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcaaaggatgatggcaaagcaccaagcaacccaatggaagagaggaagctg
atggagctgtgcaatcctagtcaccatcatcatcgccatccactccatggtgcctcatgc
cacaacaccaggagatatcaggctgctgcagcgtacccagctttactaccacttccattc
accttgcctttgcctttgcctttgcctcctcctctcctccttcatatccctcctatcgcg
tccctcccgcagggcatcaacatccccaagccgaaagcacacatccacaaagccttgtgg
aaggagaagcccgtttgcgatggaaagttggaggccaaggttgctgtcttgccgctctct
ccagaaatcaaggtgatcaaaccacaaatcgactcagttcttgcacaaaaaagctcccaa
atagatgaaaaatgcatgggctttgatcaaaagtctctgcttgatttacaagctttggtt
gccaccaagaggcctgattcgggaggtagagaggggtctacaattcacctcctagcaaat
cacttcctagtgcaatttgacccctcgcaaagagtctaccattatgatgtgaatatatcc
ccacgtccctcaaaggaaattgctagaatgatcaagagaaaactcgtagaagacaattcg
gatgtgctttcgggtgctttgccggtttttgatggcagaaagaacttgtacagtccaatt
gagttccaagaacacaagcttgagttctttgtaagtctccctattcccgttaccaggtgc
ttgcctaatcaaaacggtagcttgattgggaaagtgaagtctaagttattcagggtgaac
ataagattaacttccaagctcagcggtgaggacttggataaatttttgaaggaagagaag
gactgtgtgcctctgccgcaagactttcttcatgcattggatgttgtcttgcgcgagaat
gcaacagagaattgcctccagatggagaggtcgttgtactcgaacaccatgggcggagca
aaagacattggtggtggagttgtgggtatgagaggcttctttcaaagcctcagaccaaca
aaacaaggccttgcgcttaatgttgatttctgcgtgactgcctttcatgagagcatcggc
gtcatcccgtaccttcaaaagcgttgtgattttctacgagatctctctcagaagaagact
aggggattgattggagaagaaaagaatgaagttgagaaggctttaaagaacattagagtc
tttgtttgccaccgagaaacagatcagagatatcgggtttatggcttgacagacgaagtg
actgagaatctcaagtttagagatagagatgggaaatacttgatgctggttgattatttc
agggaccagtataatcatgacatacaattcagaaacctcccatgcttacaaatcagcaaa
agtaagccatgttatctgccaatggagctatgcatggtttgcgaaggccagaagttcctt
ggaaaactttcagatgagcaggcgacaaggattctcaagatgggctgccaacgaccctgt
gaaaggaaggagatcatcaacaatgttatgggaggaagagcaggcccaacaagcggacat
tatgcagatcaattccagcttcaagtttctcgcgagatgacacaactctgcggaagaatt
cttgagcctccaaagctcaagcttggtgatggtgggcttgttagagatgtaacaccttcg
cggtacgatcgacaatggaattttcttgatagtcacgtagctgaaggctgccatattaca
agatgggctgtggtaagttttggtggaaccccagagcagagatcctgcattcctaagttc
ataaaccagctctcttatagatgtgaacagcttggaatattcttgaataagaagacagtc
atcagcccaatttttgaacagatgcaagtcctgaacaatgttcctgttctcgaaagcaag
ctcaggaagattcatgatgcttcggggaatttacaactacttatctgcataatggagaag
aaacataaaggttatgctgatctgaagagaatttccgagactgtcattggtgtcataagt
cagtgttgcttatattccaacctaaccaagctcacttcacaatttctagcaaatttatcc
ctaaagatcaatgctaagcttggtggctgcaatgtagcattatacaacacccttccttgc
caaattccgacaattttctctgaggataacccctcaatcttcatgggtgccgatgtcact
catccacacccactggatgatgttagtccatctgttgcagctgttgttggcagcatgaat
tggccggcagcaaataaatacacatcgaggatgagatcccaaactcatcgccaagagatt
atcgaagacctagctgatatggttggtgagctaattgaggagttctttttatcaggtaac
aaacttcctagcagaattatcttcttcagggatggtgtaagtgagactatgtttcataag
gtgctaaaggaagagctccgggccatttgggtggcttgtttgagatttctcaattacaag
ccaactattactttcattgtggtccaaaaaaggcaccacactaggctctttttcaatgaa
aagaaggcttctactggccacttcttcgacgagaacatacctcctggaactgttgtggac
actgtgattacgcatccgagggaatttgatttctacctgtgtagtcattgggggatgaag
gggacaagtaggccaacccattatcatgttctatgggacgagaaccagttcaagtctgat
gaagtgcagaaactgatacacaatctttgttacacatttgtcaggtgcaccaaacctgta
tcgctcgccccgcccgtgtattatgctcatctagctgcatacagaggcagattgtacctc
gacaggtcagactctactgcattcacaagacaaacgctatcgagagctggacctctaccg
actgtgccactgcctaagcttcgagacaatgtcaagaagctaatgttctactgctga
DBGET
integrated database retrieval system
