KEGG   Zingiber officinale (ginger): 122027385
Entry
122027385         CDS       T08725                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof03015  mRNA surveillance pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122027385
  09122 Translation
   03013 Nucleocytoplasmic transport
    122027385
   03015 mRNA surveillance pathway
    122027385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122027385
   03041 Spliceosome [BR:zof03041]
    122027385
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122027385
Spliceosome [BR:zof03041]
 Complex C
  Other components
   EJC/TREX
    122027385
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 122027385
NCBI-ProteinID: XP_042442269
LinkDB
Position
10A:23990015..23995568
AA seq 200 aa
MAAVVGEVDVVDFEPDEDDLMDEDVGAAEADPSPAPKLRSTVAGSGSSGLEPRKTKGRGF
REEAGPNRGIRLSARDFDSLDSDGGPGPQRSIEGWIVLVTGIHEEAQEDDLHNAFREFGQ
VKNLHLNLDRRTGFVKGYALIEYENFDEAQAAITTLNGTELLTQTIFVDWAFSKGPMKRR
NTRRRSPRAHRSRSPPRRRY
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggctgtcgtcggggaggtggacgtggtggatttcgagcccgacgaagatgatctc
atggacgaggacgttggtgctgctgaggccgacccctcccctgcacccaagctccgatcc
acggtcgccgggagcggctcctctggattagaacccaggaaaaccaaaggtcgcggtttc
cgcgaggaagcaggtcccaatcgcggcatccgtctctccgccagggattttgattccctt
gactccgatggaggccccgggccgcagcggtctattgagggatggattgtgctggtaact
ggaattcatgaagaagcacaggaagatgatctgcacaatgcctttcgtgaatttggccaa
gtaaaaaatttgcatttaaatcttgatcgtcgcactggttttgttaagggttacgctttg
attgaatatgagaactttgatgaagcccaagctgcaattacaacactgaatggaactgag
ctccttacacaaacaatttttgtcgattgggccttcagcaaaggtcctatgaagcgtaga
aacacaaggagaagatccccacgagctcatcgttcaaggagtcctccgaggaggagatac
taa

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