Zingiber officinale (ginger): 122027397
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Entry
122027397 CDS
T08725
Name
(RefSeq) RING-H2 finger protein ATL40-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122027397
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122027397
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122027397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
PHD
Tmpp129
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122027397
NCBI-ProteinID:
XP_042442282
LinkDB
All DBs
Position
10A:707332..708428
Genome browser
AA seq
244 aa
AA seq
DB search
MSDSMPPPIQWRRPPDQDRNNSYNMSTGILATGFISLALVLAVLVFLHIYVRHVLRRQIP
RGGGSRRRLTAVDLFRFHAVIAGIDQHPDAAGLDPAAIAALPSFPYRKTPPGEEVEEEAA
GGGAECAVCLSAVEEGEMVRRLPACKHVFHVGCVDMWLASHVTCPVCRATVEPITANAEV
VEVGEPSLSAAAAGPSGAKEGGSASSRFALSASLKRMVSRSRSSSSRRSPEESTEDLPSN
LDRL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcgatgccgccgccaatccagtggaggaggccgcccgaccaggaccgcaac
aactcctacaacatgagcaccggcatcctcgccaccggcttcatctctctggcgctcgtc
ctggccgtcctcgtcttcctccacatctacgtgcgccacgtcctccgccgccagattccc
cgtggcggcggcagccgccgccgcctcaccgccgtcgacctgttccgcttccacgcagtc
atcgccggcatcgaccagcacccggacgccgcggggctcgatcccgctgccatcgccgcc
ctcccgtccttcccctaccggaagacgccccccggggaggaggtggaggaggaggccgcg
ggcggcggagcagagtgcgcggtgtgcctcagcgcggtggaggaaggggagatggtgcgg
cggcttccggcgtgcaagcacgtgttccacgtgggctgcgtcgacatgtggctggcatcg
cacgttacctgcccggtttgccgcgcgacggtggagccgattacggccaacgccgaggtg
gtggaagtcggagaaccttcgctgtcggcggccgcggcggggccgtcgggagcgaaggag
ggcgggtcggcgtcgtcgcggtttgctttgagcgcgtcgctgaagaggatggtgagccgg
agccggtcgtcgtcgagccggcggtcgccggaagaatcaacagaagatttgccgtctaat
ctggacagattgtga
DBGET
integrated database retrieval system
