Zingiber officinale (ginger): 122027436
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Entry
122027436 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122027436
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122027436
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122027436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
Prok-RING_4
zf-C3HC4_2
zf-C3HC4
Sina_RING
zf-RING_UBOX
zf-RING_5
zf-RING_2
TerY_C
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122027436
NCBI-ProteinID:
XP_042442331
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All DBs
Position
10A:complement(26744554..26747531)
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AA seq
442 aa
AA seq
DB search
MGAKSSIEGRRREARSSSPPYHGTRHTEQPYSTSDHAHEYWISHQSHYHHHRHPPPYEFH
SMAHPSLSPTNTTSVKKPKLEHKFSRIADGFTSLQQVTEELTKSGLESSNLIVGIDFTKS
NEWTGKNSFHGSSLHHVGTTKNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQDVF
SFYPGNRPCHGFEEALDRYREIAPFVQLSGPTSFAPIIEMAMTIVEQSGGQYHVLLIIAD
GQVTRSVNPQEQKTVDAIVKASKYPLSIILVGVGDGPWDTMHEFDDNIPARSFDNFQFVN
FTEIMSKNAPESLKEAEFALAALMEIPLQYRATLDLGILGQHARTSPRRVALPPPATVPN
SVPPSPGSMQSSSSYSSHSTTPAPSAPAASTSSDTQVCPVCLSNLKNMAFGCGHQICHDC
GSLLSSCPICRRTIETRIKLYS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggagctaaaagctcaatcgaaggcagaaggcgggaagcaagatcttcatctcctccc
taccatgggacacggcacacagagcagccttactccacaagtgatcacgcccatgaatat
tggatttcccatcagagtcactaccaccatcaccgtcatcctcctccatatgagtttcat
tccatggcacacccatcgctgtctccaactaacacgaccagtgtaaagaagcccaagttg
gaacataagttctcgaggatagccgatggctttacctccttacagcaggtaacagaggag
ctgacaaaatctgggcttgaatcatcgaatctcattgtaggaattgacttcacaaaaagc
aatgagtggacaggtaagaactcgttccatggcagcagcttgcaccacgttggaactact
aaaaatccttatgaacaagcaatttccattattggacgaaccttgtcatcatttgacgaa
gataacttaatcccatgctttggtttcggagatgcatctacccatgaccaagatgtattt
agcttctacccagggaacagaccgtgccatggattcgaggaagctttagatcggtatcga
gaaatcgctccgtttgtgcaattatctggaccgacatcttttgcaccaattattgaaatg
gccatgaccattgtggagcagagtggagggcaataccatgttctattgataattgctgat
ggtcaggtaacaagaagtgtaaatccccaagaacagaagacggttgatgctattgtcaaa
gctagcaagtatcccttgtccattattttagttggagttggagatggaccatgggacacg
atgcatgaatttgacgacaacatacctgctagatctttcgacaatttccagtttgtgaat
ttcactgaaattatgtccaagaatgcaccagaaagccttaaagaggctgagtttgctctt
gcagcgctcatggaaatacctttgcagtacagagcaacactggatcttgggattttgggt
cagcatgctagaacatcaccaagaagagtggctcttccacctcctgctactgttcccaat
tcagtacctccttcgcctggttctatgcagagctcatcgtcttattctagtcatagtaca
actcctgctccatcagcaccagctgcaagtacctcttcagacactcaggtttgtccagtt
tgtctttccaacctgaagaacatggcatttggctgtggccatcagatatgtcacgattgt
gggtcacttctcagctcctgccccatttgccgtagaacaattgagacaagaataaagctg
tattcatga
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