Zingiber officinale (ginger): 122027560
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Entry
122027560 CDS
T08725
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122027560
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122027560
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122027560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
zf-RING_UBOX
zf_RING_Vps8_fungal
Prok-RING_1
zinc_ribbon_16
PHD_NSD
PHD
zf-RING_Vps41
RINGv
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122027560
NCBI-ProteinID:
XP_042442479
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All DBs
Position
10A:complement(52742937..52757498)
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AA seq
275 aa
AA seq
DB search
MENGEESGAGSKRSTAEANPDPDPPPTSPSRTPFTSLSQVDADLALARALQEQERAYAML
RMNGADGSDYESSDAGSYDYDEEENGDDVGDEADHVIEEGGSIEGSDYGEDAFDANDPVV
DPEDFENDEEFARALQDAEEREVAVRLMSLAGLNEWVSDDHGDHGGNSQDAWQEIDPDEY
SYEELVALGEVVGTENRGLSFETIAALPSVNYKAENVQDNNAEQCVICRLEYEDGDSLVV
LSCKHKYHSECINKWLQLNKACPICNTEVSTSGSK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggggaagagagcggcgccggaagcaagcggtccaccgccgaagccaacccc
gaccctgatccacctccgacctctccctctcgcactcccttcaccagcctcagccaggtc
gatgccgacctcgccctcgcccgcgccctccaagaacaggaaagggcgtacgcgatgctg
aggatgaacggcgctgatggcagcgattacgagagttctgacgcaggcagctatgattac
gatgaggaggagaatggggatgatgtgggagacgaggcagaccatgtgattgaggaggga
gggagcatcgaggggagtgactacggagaggacgccttcgatgccaacgatcctgttgta
gatccggaggatttcgaaaacgatgaggagtttgcaagggctctgcaagatgccgaggag
cgggaggttgctgttaggttgatgtcccttgccggattgaatgaatgggtgtccgatgat
catggtgaccatggcggtaattctcaggatgcttggcaagaaattgatccagatgaatac
tcatatgaggagctggttgcactgggggaagtagttggaactgaaaacagaggcctttct
ttcgaaacaattgctgctctgccttcagtcaattacaaggcagaaaatgtgcaagataat
aatgctgaacaatgtgttatatgccggctggaatatgaggatggtgattcattggtggtg
ctttcttgcaagcataaataccattctgaatgtattaacaagtggctccaactaaacaag
gcatgccctatctgcaataccgaggtctctacatcagggagcaagtga
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