Zingiber officinale (ginger): 122027579
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Entry
122027579 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122027579
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122027579
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122027579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-C3HC4
Zn-ribbon_GIR1
DUF2062
Motif
Other DBs
NCBI-GeneID:
122027579
NCBI-ProteinID:
XP_042442498
LinkDB
All DBs
Position
10A:complement(21468535..21486319)
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AA seq
379 aa
AA seq
DB search
MSSRNRELAAAIGRLAASCDGAILGLALAAVATASWLKHFATSAALGRIKAAPSASISGL
RSIISDGEEEPILVVVRGRVQPTSAIEAHGIWGPFKREGVLTPHGSDESAVAILSTQTCL
YNEWKGMLSWSLDLQSILFRTTKEQKSSSLRLVPFILVEDSAWPNSGYVHVNLDGSTQPL
PLTTVYHELHPIQATPLTFFQVMLGSGYPVALLNEEKILPIGKEVTAIGICSIRNGAIEI
KSSKDLPCFLADMTKDEIVTELNFNARILFWGGVLLGTLSVGILCYAIVRNFWRWKEWRL
RRQIEDLEEAIVENSSEGEDVPDGQLCVICLTTQRRSAFIPCGHLVCCPPCAMHVARDRS
PKCPVCRQTVRSSIRIYDS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtaaccgtgaactggcggcagccatcgggcgcctcgccgcgtcctgcgac
ggcgctatcctaggtctcgcccttgcggccgtcgccacggcctcctggctcaagcacttc
gctacctctgctgcccttggccgcatcaaggctgccccctccgcctccatctccggcctc
cgctctatcatatccgatggagaagaggagcccatcctggttgtcgtccgaggtcgtgtc
cagccaacctccgccatagaggcccacggcatctggggacctttcaagagagagggtgtc
ctcactccccacggctccgacgagagtgctgttgcgatcctcagcacccagacgtgtctt
tacaatgaatggaagggaatgctctcgtggagtcttgacctccagtccattcttttcaga
acaaccaaggagcaaaagtcaagctcattgagattggttccatttattctcgttgaagat
tctgcatggcctaattcaggctatgttcatgttaatttggatggttcaacccaaccacta
cctctgactacagtttatcatgagctgcaccctattcaagctactcctttaacattcttc
caggtcatgcttggctctggatatcctgtggcactgttgaatgaagaaaaaatccttcca
attgggaaggaggtcactgcaattggcatctgcagcattagaaatggcgccatagagata
aagtcatccaaggatcttccttgtttcttggctgacatgacaaaggatgaaattgtaact
gaacttaatttcaatgcaaggatcttattctggggtggtgttctgcttggaacactgtct
gttggtatattatgctatgccatcgtcaggaacttctggaggtggaaagaatggagacta
aggcgacaaattgaagacttagaagaggccatagtggaaaacagctctgaaggggaggat
gtacctgatgggcaactttgtgttatttgtttaacaacacaaaggagatctgctttcatt
ccttgtgggcatcttgtttgttgtcctccctgtgcaatgcatgtagcccgtgaccgttca
ccaaaatgtcctgtgtgtcggcagactgtacggtcctccattagaatatatgattcttga
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