Zingiber officinale (ginger): 122027669
Help
Entry
122027669 CDS
T08725
Name
(RefSeq) tryptophan synthase beta chain 1-like
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122027669
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122027669
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122027669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
122027669
NCBI-ProteinID:
XP_042442596
LinkDB
All DBs
Position
10A:complement(44874954..44878786)
Genome browser
AA seq
470 aa
AA seq
DB search
MTASATLALGNPSLGLAKPLPSSFLGVWIHPQSGLLRRVGLASPSSGLAVSCTMTKEVTA
VEASKYENPGLGLRPDSFGRFGRFGGKYVPETLMYALTELEEAFWALSKDEEFQRELEGI
LRDYVGRESPLYFAERLTEHYRRSDGQGPHIYLKREDLNHTGAHKINNAVAQALLAKRLG
KKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMKLLGAEVRAVHSG
TATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGG
KPDVLVACVGGGSNAMGLFHEFVDDRDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGA
MSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYFSVTDEQALEAFKQLSRL
EGIIPALETSHALAYLEDLCPTLPDGSKVVVNCSGRGDKDVQTAIKHLHL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttccgcgacattggcgctcggaaaccctagcctcggcctcgccaaaccgttg
ccgtcgtcctttctcggcgtctggatccatccccaatctggattgttgcgccgagttggc
ttagcgtcgccgtcgtccggacttgctgtctcctgcactatgaccaaggaagtcacggcc
gttgaggcaagcaagtacgaaaatccgggcttggggcttagaccggattccttcggtcgg
ttcggccgtttcgggggcaagtacgtgccggagacccttatgtacgccctcactgagctc
gaggaggcgttctgggcactctccaaagacgaggaattccagagagagttagaaggaatt
cttagggattatgttggacgagaaagcccactttactttgcagagcggctgacagaacat
tacaggcgttctgatgggcaaggccctcatatttatctaaagagagaagatcttaatcat
acaggtgctcataagatcaataatgctgttgcacaagctttacttgccaaaaggttggga
aagaagcgcatcatagcggagacaggagctggtcaacatggggttgctacagctactgtc
tgtgctagatttggcttggaatgtattatttatatgggtgcccaggatatggagaggcaa
gccctaaatgtatttcgaatgaagcttcttggagctgaggtaagagctgtccattctgga
actgccacactaaaggatgccacttcagaagccatacgtgactgggtgaccaatgttgag
acaactcattacattttagggtctgtggcaggtccacatccttatccaatgatggttagg
gaattccatgcagtaattggcaaagagacaagaaagcaagctttagagaagtggggtggg
aagccagatgttcttgttgcatgtgttggtggaggttcaaatgccatggggctcttccat
gaatttgtcgatgatagagatgtgagattagtaggtgtagaggctgctggctttggattg
gacagcggtaaacatgcagcaacattaacaaagggagaagtaggggttcttcatggtgcc
atgagttatttgctacaggatgatgatggtcaaataattgagcctcattctataagtgct
gggttggactaccctggagttggtcccgagcacagctatttgaaggatattggacgagct
gaatactttagtgtcacagatgaacaggctttggaagctttcaagcaactgtcacggctg
gagggtatcatccctgctcttgaaacttctcatgcgcttgcatacttggaagatctctgt
ccaactttgccagatggctcaaaggtggttgtcaattgcagtggcaggggcgataaggat
gtccaaactgctataaagcatcttcacctgtaa
DBGET
integrated database retrieval system
