Zingiber officinale (ginger): 122027792
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Entry
122027792 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
zof04382
Cornified envelope formation
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122027792
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122027792
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122027792
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122027792
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
122027792
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Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
122027792
NCBI-ProteinID:
XP_042442735
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Position
10A:5966869..5970776
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AA seq
508 aa
AA seq
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MSPPLFLLLPPLPPIPPLAVPREIRRMVRLTFPTALLTLIGYGIFFTFGLLRDLFRKLLN
WSKSDDPKGYAPICPAFEDFYTRRIYHRIQDCFGRPIASAPDAWIDVVERYSNDNNKTLH
RTTNTTRCLNLGSYNYLGFAAGDEYCTPRVIESLESYAPTTCSSRADAGTTKLHTELEEL
IARFVGKPAAITFGMGYVTNSSIIPALVGEGGLIISDSFNHNSIVNGARASGATVMVFQH
NGPSQLEELLRKQIVKGQPDTGEPWKKIMVIVEGIYSMEGEFSKLPEIVAICKKYKAYIY
LDEAHSIGAVGKSGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASEDIIQYLRYAC
PAHLYATSMSPPAVQQVISAIKVVLGEDGSNRGAKKLAQIRESSNYFRSELKKTGFVVLG
DNDSPVMSIMLYNLAKLPAFSRECLRQNVAVVIVAYPATPVLLARARICISASHTREDLI
RGLKVISEVGDLVGAKCLPAEPEKIKFD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctgttcctcctactcccgccgctaccgcccattcccccactcgcggtg
ccgcgggagatccgccggatggtgaggctcactttcccgaccgccctcctcaccctcatc
ggctacggaatctttttcactttcggtctcctccgcgacctcttccgcaagctcctcaac
tggtccaagtccgacgaccccaagggttatgcgcccatatgtccggcgttcgaggatttc
tacacccgtcgcatctaccaccgcatccaggattgttttggccgcccaattgcgagtgca
ccggatgcttggatcgatgtggttgagcgttactccaatgacaataacaagactctacac
cgaactacaaacacaacaaggtgcctcaacctcggatcatacaactatcttggttttgca
gcaggagacgagtactgcacacctcgtgtgatcgaatctctcgagagttatgctcctact
acttgcagctctcgggctgatgcagggaccactaagttgcatactgaacttgaggagttg
atagcacgatttgtggggaaacctgcggctattacttttggcatgggatatgtgacaaac
tcttccataattcctgctttagttggagagggtggtctaatcattagtgattcattcaac
cataattccatcgtcaatggtgctcgagcttctggtgccacggttatggttttccaacac
aacggtccgtctcagttggaagaattgctgagaaagcagatagttaaggggcagcctgac
actggcgaaccatggaagaagataatggtcattgtggaaggaatatacagtatggaagga
gagttctctaagctgcctgagatagtagctatctgcaagaagtacaaggcatacatatat
ttggacgaggcacacagcataggcgctgttggaaaatctggcagaggtgtttgtgagctc
ctcggggtggatccagctgatgttgatatcatgatgggaacttttaccaagtcatttggg
tcctgtggaggctatattgcagcttcagaggatatcattcagtacctcaggtacgcttgc
ccagctcatctctatgccacgtccatgtcgccaccagcagttcaacaagtaatatctgca
atcaaggttgttcttggggaagatggatcaaacagaggagccaagaaacttgcacagatt
cgcgagagcagcaactacttccgatcagaacttaagaagacgggctttgtggttcttggc
gacaatgactcaccagtcatgtctattatgctatacaacttagctaaactccctgctttt
tctcgtgaatgcttaaggcagaatgttgcggttgtgattgtagcataccctgcaaccccg
gttttgcttgccagggccaggatctgcatatcagcttcccataccagggaagacctgata
agaggcttgaaggtcatcagcgaagttggtgatcttgtaggggcgaagtgcctccctgcc
gaaccagagaagataaagtttgattga
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