Zingiber officinale (ginger): 122027816
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Entry
122027816 CDS
T08725
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122027816
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
122027816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
ACT_9
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
122027816
NCBI-ProteinID:
XP_042442757
LinkDB
All DBs
Position
10A:24560999..24568064
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AA seq
980 aa
AA seq
DB search
MSQRDKSCFSSSPSFPISRFVLFIYLTIGREAQNLTLVLHRLCNGASAFSHLLLFGGQMA
GSLVQSAILPTVAVNRGQSQLRGSGKAKRGAMMLCHQKTPVLQLQGFSGLRRVDNLGTSS
RCNHDFCSVVSRYISYPRGKTSRGVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ
ILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSL
EEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMVGESTEAVGAG
VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPCVGRQPQIERVTQILGRRTKNNPCLIGEP
GVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ
SDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPAL
ERRFQPVKVPEPTVDETILILRGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDK
AIDLIDEAGSRVRLRHAQLPEEARELDKELRQITKEKNDAVRGQDFEKAGELRDREMELK
AQISALIDKGKELSKAESEAGDGGPIVTESDIQHIVSSWTGIPVEKVSSDESDRLLKMEE
TLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG
SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP
DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS
YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDIEL
QVTERFKDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEIKEGDSAIVDVDSEGN
VTVLNGGSGLPESVPPAIPV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagagagataagtcttgcttctcctcatccccttccttccccatctcccgtttc
gttctctttatttatttaactattggccgagaggcccaaaatctgactcttgttctccac
cgcctctgcaacggagcttcggctttctctcatcttctactgttcggaggacagatggcc
ggttctttggttcaatctgcaattcttcccactgttgcagtgaacagaggacaaagtcag
ctgcgaggctctggaaaagctaaaagaggtgccatgatgctgtgccatcaaaaaacacct
gtacttcaattgcagggtttctcaggcttaagaagagtagataacctaggcacttcttca
agatgcaatcatgatttttgttcagttgtttcaagatatatatcttatccccgggggaaa
accagtcgaggagttgccaaagctatgtttgaacgttttacagagaaggcaattaaagta
ataatgcttgctcaggaagaagcaagacgtctaggtcataattttgtcggaacagaacaa
atactgttgggccttattggtgaaggaacaggtatcgctgcaaaagttttaaaatcaatg
ggaattaatcttaaagatgccagggtggaggtggaaaagatcataggaaggggaagtgga
tttgtagctgttgagataccttttacacctcgtgcaaagcgtgttttagaactctcatta
gaggaagctcggcagcttggacataactacattggatcagaacatttacttcttgggctt
cttagagagggcgaaggtgtagctgcacgtgtgcttgagagtcttggagctgatcctagc
aacatccgtacccaggtcattcgaatggtaggagaaagcactgaagctgtcggtgcaggg
gtaggtggtggaagcagtggcaataagatgcctacacttgaggagtatgggactaatttg
acaaagttggcagaggagggaaagttagatccatgtgttggcaggcaaccacaaatagaa
cgagttacacaaattttgggcaggcgtacaaagaataatccctgcctaattggggagcct
ggtgttgggaagacggccattgcagaaggacttgctcagcgcatagccaatggtgatgtt
ccagaaacaattgaagggaaaaaggtgattacccttgatatgggtcttcttgttgctggt
actaaatatcgtggagagtttgaagaaaggctaaaaaagttgatggaagaaattaaacaa
agtgatgaaataatactattcattgatgaagtccatacattaattggagcaggagcagca
gaaggtgccatagatgctgctaatatcttaaagccagctcttgcaagaggtgaattgcag
tgcattggagccacaacacttgatgaatacaggaaacacattgagaaggatcctgctttg
gaaaggcgttttcagcctgtaaaagttccagaaccaacagtggatgaaacaatactgatt
cttagagggctacgggaaagatatgagattcaccacaaacttcgttacactgatgaggct
ttagttgctgctgctcaattgtcctatcagtacattagtgatcgtttcctaccggataaa
gcaattgacttgattgatgaagctggatctcgtgttaggcttcgccatgcacagcttcct
gaggaggccagggaacttgacaaagagcttaggcagatcaccaaagaaaagaatgatgca
gtccgtggtcaagattttgaaaaggcaggggaattacgtgatagggagatggaactgaag
gctcagatctcagctctgattgataagggcaaagaactaagcaaagcagagagtgaggcg
ggtgatggtggtcctattgtaacagaatcggacatccaacacattgtatcttcatggact
ggaattcctgttgagaaagtctctagtgatgagtctgatcgcctccttaagatggaagaa
actctccataaacgtattattgggcaggatgaggctgttcaagccataagccgcgccatt
cgtagagctcgtgtgggtcttaagaatcccaatcgcccaattgctagcttcatattttct
ggtccgactggagtaggaaaatcagaattggcaaaggcactagctgcttattattttggc
tctgaggaagctatgatccggcttgacatgagtgaatttatggagagacacacggtttca
aagctcattggttcaccccctggttatgttggttacactgagggtggtcaacttactgaa
gcagttcggcgccgcccttatactgtcgtcctctttgatgagatagagaaagctcacccc
gatgtcttcaacatgatgctccagattctagaagatgggaggttgaccgacagcaaaggg
cggacagtggacttcaagaacaccctcctaatcatgacctctaatgttgggagcagtgta
atcgaaaagggaggacgtagaattggattcgaccttgactatgatgaaaaagatagcagc
tacaaccgaatcaaaagccttgtgacagaggagttgaagcaatacttccgtccagaattc
cttaatcggcttgatgaaatgatagtcttccgacagttaaccaaactggaagtcaaggag
attgctgatataatgctcaaggaggtctttgacaggttgaaagccaaggatatcgaacta
caagtgacagagagattcaaggatagggtggtggatgaaggttacaacccaagttacggt
gccaggccactgagaagagccataatgaggctcctggaggatagcttggctgagaaaatg
ttggctggggagatcaaggaaggagactcagctattgtggatgttgattctgaaggaaat
gttactgttctaaatggtgggagcggcttgcctgaatcagttcctccagctattcctgta
tag
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