Zingiber officinale (ginger): 122028134
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Entry
122028134 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122028134
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122028134
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122028134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-C2H2_3
zf-ANAPC11
PHD_NSD
VPS18_RING_C
RINGv
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
122028134
NCBI-ProteinID:
XP_042443083
LinkDB
All DBs
Position
10A:45728581..45752312
Genome browser
AA seq
240 aa
AA seq
DB search
MSINNTQMDVHYINTGFPYTVTESFMDLFEGLTYAQADAALSETLHDQGNTYWSMMYTNA
YKYGFPGSSIDSYYDFGHFEVADYAQRSGERREWDNPLVLNNFDSQQTQHNEYAHESQNH
GAEECIQVQQNANSSQVIWEDHVDPDSMTYEELLELGETVGTQNRGLTQERIASLPITKY
KCSFFSRKKTQRERCVVCQMEYKRGDRQMILPCKHVYHPVCVSRWLSINKACPICSVEVR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaataatacacagatggatgttcattatataaatactggatttccttacact
gtcactgaaagctttatggatttgtttgagggccttacatatgctcaggctgatgctgcc
ctttcagaaactttgcatgaccagggaaacacatactggtcaatgatgtacacaaatgca
tataaatatggatttcctggctcttccattgattcatattatgattttgggcactttgag
gttgctgattatgcccaaagatcaggtgaaaggagagaatgggacaaccctctagttctg
aacaattttgactcacaacaaacacaacacaatgaatatgctcatgaaagtcaaaatcat
ggtgccgaggagtgcattcaagtgcagcaaaatgctaatagttctcaggtcatatgggaa
gaccatgttgatcctgatagtatgacttacgaggaattactcgagttgggtgagacagtt
ggaacacaaaaccgaggtcttacacaagaacgaattgcttcacttcctatcacaaagtac
aaatgtagtttcttttctaggaagaaaactcaacgtgagagatgcgtggtttgccagatg
gaatacaagagaggagatcgtcaaatgattcttccatgcaagcatgtataccatcctgtg
tgtgtatctagatggcttagcataaacaaggcatgtccaatatgctctgttgaggtaagg
taa
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integrated database retrieval system
