KEGG   Zingiber officinale (ginger): 122028185
Entry
122028185         CDS       T08725                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122028185
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122028185
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122028185
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-C3HC4_4 FANCL_C zf-ANAPC11 zf_RING_Vps8 Prok-RING_1 RINGv PHD Prok-RING_4 DUF5857 SLX1_C zf-RING_4 zinc_ribbon_16
Other DBs
NCBI-GeneID: 122028185
NCBI-ProteinID: XP_042443150
LinkDB
Position
10A:3701966..3703194
AA seq 145 aa
MGISSLPNPSESVLTLFLFNVALAVSILKEFLRSALHFLRLSSPPPAELDGGGGAAEPGL
AERFRKRCRPFRFGSALERRRAADCRVCLGRFEPESVVNRLACGHLFHMACLETWFEYHH
ATCPLCRAHVLHGEEPTASFSPSLS
NT seq 438 nt   +upstreamnt  +downstreamnt
atgggaatctcgagcctacctaacccgtctgagagcgtgctcactctgttcctcttcaac
gtcgcgctcgccgtctccatcctgaaggagttcctccgctcggcgctccatttcctccgc
ctcagctcgccgccaccggcggagttggacggcgggggcggcgcggcggagcccggtctc
gccgagcgcttccggaagcggtgcaggccgtttcggttcgggtccgcgctggagcggcgg
cgggcggcggactgccgggtttgcctcggccggttcgagcctgagtcggtggtgaaccgg
ctcgcctgcgggcacctcttccacatggcttgtctggagacgtggttcgagtaccaccac
gccacttgtcccctttgtagggcccacgtcctccacggggaggaacccaccgcttcattt
tcaccttcactctcatga

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