Zingiber officinale (ginger): 122028264
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Entry
122028264 CDS
T08725
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122028264
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122028264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122028264
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122028264
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
122028264
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
122028264
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
122028264
RhoA-dependent endocytosis
122028264
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122028264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
PH_8
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AIG1
PH_20
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
122028264
NCBI-ProteinID:
XP_042443236
LinkDB
All DBs
Position
10A:97829496..97842576
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AA seq
928 aa
AA seq
DB search
MEALEELSELADSMVQASALLADEDVDEGSTKRRTSTFLNVVALGNVGAGKSAVLNSLIG
HPVLPTGENGATRAPISIDLQRDSSLSTKSIVLQIDSKSQQVSASALRHSLQDRLSKGTG
VQGSGKGRADEIYLKLRTSTAPSLKFIDLPGLDQRSMDDSVVSDYGARNDAILLVIVPAA
QAPEISSSRALRLAKEFDSEGTRTIGVISKIDQAAGDQKSLAAVQALLLSQGPPSTADIP
WVALIGQSVSIASAQAGSIGSESSLETAWRAETESLKTILTGAPQNKLGRVALVDTLSKQ
IRSRMKLRLPNLLSGLQGKSQIVQDELFRLGEQMVESAEGTRAIALELCREFEDKFLQHV
ATGEGAGWKIVATFEGNFPSRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSL
IKGVLELAKEPSRLCVDEVHRVLLDIVSASANATPGLGRYPPFKREVIAIASTALENFRN
EAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNRSSKKANEAEQAISNRASS
PQPGAQGGSLKSMKEKPNQQDKETKEGSTSTLQVAGPSGEITAGFLLKKSAKTNGWSKRW
FVLNEKSGKLGYTKKQEEKHFRGVITLEECNLEEVQDEDDPPKSSKDSKKANGPDKSPSL
VFKITSKIAYKTVLKAHSAVILKAENMAEKVEWMDKIGNITGSSKVTSTKDASESGGTPM
RQSHSDGSLDTMVRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKED
MLNQLYSSVSGQSNVKIAELLQEDQNVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAASW
SDGGTATEISPRTKGSGDDWRSAFDAAANGSVDSSYTDSSRSRSSSNRRHGTPTQNGDAS
SGANSGSRRTPNRLPPAPPQSTSATYRY
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttggaggaactgagcgagctcgcggactcgatggtgcaggcttccgcgctc
ctcgcagatgaggacgtcgacgaggggtcgaccaagcggaggacctccacgtttctcaac
gtcgtcgctctcggcaacgttggtgctggtaaatcagcagtgttgaacagcttaatcgga
cacccggtcctgcccactggagagaatggtgctactcgagcccctatcagtattgatctg
caaagagatagttcacttagcactaaatcaattgttttgcaaatagacagcaaatcccaa
caagtctctgcaagtgctcttaggcactctcttcaggacaggctaagtaagggaactgga
gttcaagggtctggaaagggccgagcagatgagatatatttgaaactccgtactagtaca
gctccatctttaaaattcatagatcttccaggtttagaccagagatcaatggatgattcc
gttgtcagtgattatggtgcacgcaatgatgcaatattactagttattgtgccggctgct
caggcacccgagatttcttcttctcgagctctaagactggctaaggaatttgattcagaa
ggaactagaacgattggtgttatcagcaagattgatcaagctgctggggaccagaaaagt
cttgcagcagttcaagctcttcttttgtctcaggggccaccctctactgcagatattcct
tgggttgctctgattggtcaatctgtttctattgcttcggcacaggctggatctattgga
tctgaaagttcacttgaaacagcatggagagctgagactgaaagtcttaaaactatactt
actggagctccacaaaataagctcggaagagtagcgttagttgatacactttccaagcaa
atccggagtagaatgaagctcagactgccaaaccttctttcaggattacaagggaagtca
cagattgtgcaggatgagttgtttagacttggtgaacaaatggtggagagtgcagaaggt
accagggctattgccttggagctttgtcgagaatttgaggacaaatttcttcaacacgtt
gccaccggtgagggtgcaggttggaaaattgttgctacatttgaaggaaacttccctagc
agaataaaacaacttccacttgatagacatttcgatatcaacaatgtcaaaagaattgtg
ttggaggcagatggttatcaaccatatttgatatctcctgagaaaggtttgcgatctttg
ataaagggagtactagaactagcaaaagaaccatcacggctttgtgttgatgaggtccac
cgtgttctgttagatatagtttctgcttcagcgaatgctacacctggactaggtcgatat
cctccttttaaaagagaggtgattgctattgcatcaactgcattagagaacttcagaaat
gaagccaaaaaaatggtggttgcattagttgatatggagcgtgcatttgttcctccgcaa
cattttattcgtctagttcagcggagaatggagaggcagcgtagagaggatgagctgaag
aatcgatcatcgaagaaagcaaatgaagcagagcaagccatttcgaatagagcttcgagt
cctcaaccaggagctcaaggtggtagcttgaaatcaatgaaagaaaaacctaatcaacaa
gacaaagaaaccaaagagggttccacatctaccttgcaggttgctggaccttctggagaa
ataacagcaggattcttactgaagaaaagtgccaagactaatggctggagcaagcgatgg
tttgttctcaatgagaaaagtggaaagcttggatacacaaaaaagcaggaggagaagcac
tttcgtggtgtcatcactttggaggaatgtaatcttgaagaggttcaagatgaggatgat
ccacctaaaagttccaaggactccaaaaaggcaaatggaccagataaaagcccaagtctt
gtctttaagataactagtaaaattgcatataaaacagttctaaaagctcacagtgctgtc
attttaaaggctgagaacatggctgagaaagttgagtggatggacaagataggaaatatc
actggttcttcaaaagttacttccacaaaggatgcatctgaatctggaggtactccaatg
agacaaagccattcagatggttcacttgacacaatggttagaaggccagctgatcctgaa
gaagaacttcgttggatgtctcaagaagttcgaggttatgtagaggctgtcttgaacagt
cttgctgctaatgtaccgaaggcagtggtgctatgccaagttgagaaagctaaggaagac
atgttgaatcagctgtatagctcagtaagtggtcaaagtaatgtgaagattgcagaactg
ctccaggaagatcaaaatgtgaagcgtagaagagaaaggattcaaaagcaatcatctctc
ctatctaaacttacacgccaactaagcatccatgacaaccgagcggctgctgctagctgg
tctgatggcggcactgcaacagaaattagcccaaggaccaaaggctctggtgatgattgg
agatcagcatttgatgctgcggcaaatggatcagttgacagctcgtacactgactcgtct
aggtccagaagcagcagcaaccggcggcatggcactccaactcagaatggtgatgcaagt
tcaggagcaaactctggtagtcgtcgtactccaaacaggttgccgcccgctccaccacaa
agcacttcagctacgtacagatactag
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