Zingiber officinale (ginger): 122028704
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Entry
122028704 CDS
T08725
Name
(RefSeq) auxin response factor 15-like
KO
K14486
auxin response factor
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122028704
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
EcoRII-N
Motif
Other DBs
NCBI-GeneID:
122028704
NCBI-ProteinID:
XP_042443493
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Position
10B:434869..442879
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AA seq
734 aa
AA seq
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MDIDLNTIEEAEEEEEEPERLTGLGAAPAAADAPQAVSVCLELWHACAGPRIWLPKKGSL
LVYLPQGHLEYLGFSGVDCDGGRWGACRFDVPPHVFCRVMDVNLHADVGTDEVYARLSLV
SESEESEGRVDKGETEGEEGYEDGEFMSRSSTPHMFCKTLTASDTSTHGGFSVPRRAAED
CFPPLDYKQQRPSQELTAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNRKRLISGDAV
FFLRGDDGVLRLGVRRAAQSKGCIPVPEHQNPDVALTTLAVVSNAVSMKKVFYINYNPRT
SSSAFVVPYWKFIRSSESSLGVGTSFKMSNENDDASERRPTGLITGIRDIDPQRWPGSKW
RCLSVNWDDDVDTNRRNQISPWEIESIGSVIGSASLPTTGSKRAKLCLPPASMDYPILNG
NGCLDLRESASFHKVLQGQELMRLKTPNNFGFDAHIRNLQYLEGKGHPCNANRNMTSESV
SEGSRIRIPDGGSDFSLSCTGFREPVRFLGVLQGQEVFSKVPPFRGARSDAHTGNGKYGL
FDSVQTSHAGKSLPALSVGYGTLVQPSLPLIQASSPSSVLMIQEANSKTSLLLSNPCQDR
HDGNRFFPKTNGMEAMHKKEGNFGFWPSTMGYHLANEQHKLVKIHDPIIIDGKVHREKGQ
DVGQNGCRLFGFPLTERIPESNLHEKPLPFSPSLTPGKLDIGFTTSPMPQMPAKPVGCSC
IGASSLYALCAAPF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatctgaataccatagaggaggcggaggaggaggaggaggagcctgagcgg
ttgacagggctcggcgctgcccctgcggcggcggatgcgcctcaggcggtgtcggtgtgc
ctagagctctggcatgcgtgcgcggggccccggatatggctgcccaaaaaggggagcttg
ttggtgtaccttccgcaggggcatctggagtacctggggttcagtggcgttgattgcgac
ggagggagatggggagcctgccgcttcgatgtgccaccgcatgtgttctgccgtgtgatg
gatgttaatctccatgccgacgtgggcaccgatgaagtttatgcccggctctctcttgtc
tccgaaagcgaggaatcggaaggaagagtggacaagggcgagactgaaggagaagaggga
tacgaggatggtgaattcatgagcaggtcatccacgccccatatgttctgtaagactctg
actgcttctgacaccagcacccacggcgggttctctgtccctcgtcgagctgctgaggac
tgttttcctcccctggactataagcagcagcgaccttcgcaagagcttactgcaaaagat
ttgcatggaacagagtggaggtttcgccatatctacagaggccaacctcgtcgacacctt
cttacaaccggctggagtgcatttgtcaataggaagaggcttatttcaggcgatgcagtg
ttctttcttcgaggtgatgacggggtgctcagattgggtgttaggcgagcagctcagtcc
aaaggctgtattccagttcctgaacatcaaaatcctgacgtggctttaactacattggcg
gttgtttctaatgctgtgtctatgaaaaaggttttctatataaattataacccaaggaca
agctcatcagcatttgtagttccatattggaaatttataagaagctctgagagttccctt
ggtgtgggaacgagttttaaaatgtctaatgaaaatgatgatgcctcagaaaggaggcct
accggtctgataactggaatcagggacattgaccctcaaagatggcctggttcaaagtgg
agatgtctgtcggttaactgggatgatgatgtggatactaatagacgaaatcaaatttct
ccatgggaaattgaatcaattggttctgttataggctctgctagcctgccaactacaggt
tccaaaagggctaaactttgtcttccccctgccagtatggattatccaattctgaatgga
aatgggtgtctggacttgagggagtctgcaagcttccacaaggtcttgcaaggtcaagaa
ttaatgagactcaaaactccaaataattttggatttgatgctcatatccgaaatcttcaa
tatttggaaggtaaggggcatccgtgcaatgcaaacagaaacatgacaagtgaatctgtt
tctgaaggtagtaggattagaatcccagatggaggttctgatttttccttaagctgcaca
ggctttagggaacccgttcggttcctaggggtcttgcaaggtcaagaagttttctcaaaa
gttccaccatttcgtggagctcgatctgatgctcatactgggaatggtaaatatggattg
tttgatagtgttcaaacatctcatgctggaaaaagtttaccagcattgtctgtgggatat
ggtacgctagtgcaaccatcattgccactaattcaggcatcgtctccatcctcagttcta
atgattcaagaagcaaattccaagacttccctacttctatctaatccttgtcaagacagg
catgatggcaatcggttctttccaaagacaaatggcatggaagcaatgcataaaaaagag
ggaaactttggattttggccttcaacaatgggttatcatcttgctaatgagcagcacaag
ttggtcaaaatccatgatcccatcatcatcgatggtaaggtgcacagagaaaaggggcag
gatgtcggccaaaatggttgtaggctttttggatttcctttgactgaaaggatcccagaa
tcaaatttacatgagaaacctctacctttctctccaagtttaactccaggaaagcttgat
attggcttcacaacttctccgatgcctcaaatgcccgctaagcctgttggttgcagttgc
attggagcaagttctttgtatgccctgtgtgcagctccattttag
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