Zingiber officinale (ginger): 122028855
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Entry
122028855 CDS
T08725
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122028855
04120 Ubiquitin mediated proteolysis
122028855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122028855
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
122028855
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122028855
NCBI-ProteinID:
XP_042443719
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Position
10B:48265319..48287343
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AA seq
744 aa
AA seq
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MSMHERKTIDLEQGWEFMQKGITKLKNILEGLPESQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLRVKHDEFMLRELVKRWLNHKVMVRWLSRFFHYLDR
YFITRRSLPPLNEVGLTCFRDLVYQEVKDKVKDAVISLIDREREGEQIDRALLKNVLDIF
VEIGLGNMECYENDFEAHLLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAH
YLHSSSEQKLLEKVQHELLYVNASQLLEKEHSGCHGLLRDDKVDDLSRMYRLFCRIQRGL
DPVSQIFKQHVTIEGTALVKQAEDSASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN
DCFQNHSLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLE
KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM
VTDLTLARENQSGFEDYLNNNAHANPGIDLTVTVLTTGFWPSYKSFDLNLPVEMVKCVEV
FREFYQTKTKHRKLTWIYSLGTCNINAKFEHKTIELIVTTYQAAALLLFNASDRLSYSEI
MTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISSTDVFEFNNKFNDKMRRIKIPLPP
VDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKR
IEDLITRDYLERDKDNPNIFRYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcacgagaggaagacgatcgatctggagcagggatgggagttcatgcagaag
ggcatcaccaagctgaagaacatattggaagggctcccggagtcgcagttcagctcggag
gactacatgatgctctatacgactatctacaacatgtgcacccagaaacccccgcatgat
tactcgcagcagctgtatgacaaataccgcgagtcatttgaggaatacatcacgtcgatg
gtacttccttctttgagagtgaagcatgatgaatttatgttgagggagctagttaagaga
tggctaaatcataaagttatggtcaggtggctttcacgtttctttcattaccttgatcgc
tactttatcacacggaggtcacttcctccactaaatgaagttgggcttacctgcttccgt
gacctggtctatcaggaagtcaaggataaagtcaaagatgctgtcatctccttgattgat
cgagaacgtgagggggaacaaattgatagggctttattaaagaatgtcttggacattttc
gttgaaattggattgggtaatatggagtgttacgaaaatgactttgaagcacatttgctt
aaagacactgctgcctattattctaggaaagcttcaaactggattctagaagattcatgc
cctgattacatgttaaaggcagaggagtgtttaaagcgtgagaaggacagggttgctcat
tacctgcactctagcagtgaacagaagttgttagagaaagtgcaacatgagctactatat
gtcaatgctagccaacttctcgaaaaagaacattctggatgtcatggattacttcgagat
gataaggtggatgatctctcgcggatgtacagactcttttgtagaatacaacgtggctta
gatcctgtttctcaaatatttaagcagcatgtgactattgagggcactgctctagtcaaa
caggcagaagactctgcaagtaacaaaaaggctgagaaaagggatgttgttggcctacaa
gagcaggtttttgttagaaaagttatcgaactacatgacaagtacttggcatatgtgaat
gattgcttccagaatcactccctttttcacaaggcactcaaagaggcatttgaggttttc
tgcaacaagggtgttgcaggaagctcaagtgctgagttattggctactttttgtgacaat
atccttaagaaaggtggaagtgaaaaactcagtgatgaagcaatcgaagagacacttgag
aaggtcgtaaagttgcttgcttatattagtgacaaagatctgtttgccgagttctatagg
aagaagcttgctaggaggttgctctttgacaaaagtgccaatgatgaccatgagaggagc
attttgacaaagctgaaacaacaatgcggagggcagtttacttcaaagatggagggcatg
gttacagatcttacccttgcaagggaaaaccaatctggttttgaggattatctcaacaat
aatgctcatgcaaatccagggattgatcttactgttactgttcttacgaccggattctgg
ccaagttacaaatcatttgatctcaaccttcctgtcgagatggttaaatgcgtggaggtc
ttcagagaattttatcaaacaaaaactaaacacagaaagcttacttggatatattcgtta
gggacctgtaacatcaatgcaaaatttgagcacaaaaccattgagcttattgtaacaaca
tatcaggcagctgctcttcttctgtttaatgcctctgatagattgagctattcagagatc
atgactcagcttaacttgacggatgacgatgtaatcagattgctccactccctttcatgt
gccaagtacaaaattcttaataaggagccaaataccaaaaccatttcttcaactgatgta
tttgagtttaataacaaattcaatgacaaaatgagaaggatcaagatacctcttcctcca
gtggatgagaagaagaaagtaatagaagatgttgacaaggacagaaggtatgccattgat
gcctccattgtgcgcattatgaaaagcaggaaagttctaggccatcaacagttggtgatg
gaatgcgttgagcaacttggtcgtatgtttaagcctgatttcaaagcaattaagaagcgg
attgaagatctgatcactagggattacttggagagggacaaggacaacccaaatatcttc
agatatttggcctga
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