Zingiber officinale (ginger): 122028878
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Entry
122028878 CDS
T08725
Name
(RefSeq) testis-expressed protein 10-like isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122028878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122028878
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122028878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
BP28CT
Motif
Other DBs
NCBI-GeneID:
122028878
NCBI-ProteinID:
XP_042443756
LinkDB
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Position
10B:complement(84537436..84572345)
Genome browser
AA seq
878 aa
AA seq
DB search
MVRAKPASSKKQKRGVDFKKIRHKIGRKLPPPKNATNVQIKSKAIVLPQQSIASEKEGLA
VNKKGLTLRELLQQTSHHNAKIRRAALFGIKDLILKYPLELKLHKHAIIEILRVRICDND
KMVRNTLYHLLKSVIFPSSKEEITAPVISLLMAYIFNAMTLMTVDIRLMAFKFFKLLALN
YPSSFMLYAEKVLDNYIDILKNNQIYLVEKNKLINVLAGLAHCLSLIANKGQRDDRLNNQ
NQEKFQRRVLHAYKLEVHEDHAGIDSLYVKLEELVLVLINCFLESISTTCSMDVIDARSF
NCMLSTLKCIYLAVKFLGIEKLTTSVVDGRDVGQKNFNLYYNKLWETFPVHQLFQSAEKD
DDKYIILDIKIAEICLCLTKWVNGIDFLSDKLVEFIEYLLLVGTNTWEKGAHMENHIVSL
LPFIPRLLSQITANGKARLLEAFTCSFKECRVDSRLFTAYLSVVEELFLVTINTGLQMHA
SSYQDHLSHEIAWMRELPRILLHLSDEHPSNTMVVLKVLLRIGQCSVPNSPLGFEYDALQ
FLLREFYAIRSHSGSINYGPFLKLPNDCKELALCCLFYFSWLTSDFLESLAYCCLCNDME
PLILLRIVEVLQTAYMSGRVPVSEYMSFLVTLVARFRVSPERFLAKIFEEDSNRKTFKSI
TDAVFECLDQIGDSCIVLKLLFKNMLNEMLLNPPMDNFRGMLRMIIALDARLTKLSDEDI
GDLSKILCRYMVDTASSMSEDPDVACRFSGIPTFDFFLKPCIVLLIASGNVLPSVLKLLN
QFISEDCILLPSESDDKYGMDISSRINAVSRILSFMFSHKRLHINLSRNKAHIDHTLLIM
HNLLDSNKHNISYEERGRLQSGLDKMKGSICDLWIKNS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggccaagccagcctcttccaagaaacaaaaacgtggagtggatttcaaaaaa
ataaggcataagattggacgaaagttgccaccgccaaagaatgcgaccaatgtgcagatt
aaatctaaagccattgtgcttcctcagcagagtattgcatcagagaaagaagggcttgct
gtgaacaagaaaggcctgactctaagagagctccttcagcagacatcccaccacaatgct
aagataaggagagctgcactttttggtataaaggacctcattctaaagtatccattggag
cttaaacttcacaagcatgccattatagagatacttcgtgtacgtatatgtgacaatgac
aagatggtccgtaacacattatatcacctcttaaaaagtgtcatatttccttcatcaaaa
gaggaaataacagcacctgtaatctctttactaatggcttacatctttaatgcgatgaca
cttatgacagttgacattaggctaatggctttcaaattttttaaacttcttgccttgaac
tatccatcttccttcatgttgtatgctgaaaaggttcttgataattacattgatatcctc
aaaaacaaccaaatatacctagttgagaagaacaagctcatcaatgttcttgctgggctt
gctcactgcctatctttgatagctaacaaaggtcaacgtgatgatagattgaacaatcag
aaccaggaaaaatttcagcgaagagttttacatgcctacaagctagaggtgcatgaagat
catgctggaattgattctttgtacgtgaaacttgaagaacttgttctagtacttataaat
tgttttttggagtcgatttcaacaacttgttcaatggatgtaattgatgctcgatcattt
aattgcatgttgtctacacttaagtgtatatacctggctgttaaatttcttgggatagag
aagcttaccacttcagtggttgatggacgtgatgttggacagaaaaattttaatttatat
tataacaaactttgggaaacatttcctgtccaccagctttttcaatcagcagaaaaggat
gatgataaatatataattcttgatatcaagatcgctgagatatgtttgtgcctaactaaa
tgggtgaatggtattgattttctgagtgacaagcttgttgagttcatcgagtatttgttg
ctggttggcacaaacacatgggaaaaaggggcacatatggaaaaccacattgtttccctc
ttaccatttataccaagacttctttcacagattactgccaatgggaaggctaggcttctt
gaggcctttacttgttctttcaaggaatgcagggtcgattctaggctatttacagcatat
ttgtctgtagttgaagaattatttcttgttacaatcaatactggcctgcagatgcatgca
tctagttatcaagatcatctaagccatgagattgcttggatgagagagcttcccaggata
ttactgcacctatctgatgaacatccctctaacacgatggtggttttaaaagtcctactt
cgaatcggacaatgttctgtgccaaattcacctcttggttttgagtatgatgctctgcaa
tttctcttgcgagaattttatgctataagatctcattcaggatcaataaattatggcccg
tttctgaagctaccaaatgattgcaaggaacttgccctttgttgcttattctacttttca
tggctgacttcagattttcttgaatcattagcctattgctgcttatgtaatgatatggaa
ccactcatactgctaagaattgttgaggttctgcagacagcatatatgtctggtcgtgtg
cctgtttctgagtacatgagtttcttggtaactttagttgcacgctttagagtatctcct
gaaaggtttcttgccaaaatttttgaggaagattcaaatcggaaaaccttcaagtccatc
acagatgcagtatttgaatgccttgatcagatcggtgacagttgcattgtcctgaagttg
cttttcaagaacatgttaaatgagatgttactaaatcctcctatggacaatttccgtggt
atgctcagaatgatcattgcacttgatgccaggctaactaaactttcagatgaggatatc
ggcgacttaagcaaaatcctttgtcgatatatggttgatacagcatcatctatgtctgaa
gatcctgatgtggcttgtcggttcagtgggatccctacatttgatttttttctgaagccc
tgcattgttctgttgattgcaagcggcaacgtcttaccttctgtgttgaagttactcaat
cagttcatttcagaagattgtatattgcttccttctgaatctgatgataaatatggaatg
gatatctcgagtagaataaatgcagtgtcacgcatcctcagctttatgtttagtcataag
agacttcacataaatctttcaagaaataaagcacacattgatcatactcttctgatcatg
cataacttattggattcaaataagcataacatttcatatgaagaaagaggcagattacag
agtggtcttgataaaatgaagggtagcatatgtgatttgtggataaaaaattcataa
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