Zingiber officinale (ginger): 122028887
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Entry
122028887 CDS
T08725
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein A
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
122028887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122028887
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122028887
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122028887
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122028887
Exosomal proteins of colorectal cancer cells
122028887
Exosomal proteins of bladder cancer cells
122028887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
PROPPIN
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_RSE1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
122028887
NCBI-ProteinID:
XP_042443777
LinkDB
All DBs
Position
1A:113525436..113528255
Genome browser
AA seq
324 aa
AA seq
DB search
MADTLVLRGTMRGHSDVVTAIAAPIDNSDMIVSSSRDRSVLVWHLTKDAPAASVDGAGGG
SSYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGDLRLWDLATGLTTRRFCGHTKDVI
SVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIQDADAHTNWVSCVRFSPNAYQPTIVSG
SWDRTVKVWNLSNCKLRCTLAGHGGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKRLY
SLDAGAIIHALCFSPNRYWLCAATQESVKIWDLESKSVVQDLKPETTATKNQMLYCTSLT
WSADGSTLFTGYTDGAIRVWEIRY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccttggtcctccgaggcaccatgcgcggccactcagacgtggtcactgcc
atcgccgctcccatcgacaattccgacatgatcgtctcctcctcccgggacaggtccgtc
ctcgtctggcatctcaccaaggacgcccctgccgccagcgttgatggtgccggaggggga
tcttcctatggtgtgccccggcgtcgcctcaccggtcattctcactttgtccaggacgtg
gtcctctcttccgatggccagttcgcgttatccggttcctgggatggcgaccttcgtctc
tgggatctcgctaccggactcaccactcgtcgcttctgcggccacaccaaggacgtcatc
tccgtcgctttctccgtcgacaaccgccagatcgtgtcggcctcacgcgaccggaccatc
aagctttggaataccctcggggagtgcaagtacaccattcaggatgccgatgcgcacacc
aactgggtcagctgcgtccgcttcagtcccaatgcttaccagcctaccattgtctctgga
tcttgggaccgtactgtgaaagtctggaacttgtctaactgcaaacttcgatgcactctt
gctggtcatggtggctacgtcaatacagttgccgttagccccgatggatccctttgtgct
agtggtggcaaggacggagttacgcttctctgggatttggccgagggaaagcgcctttat
tcgcttgatgcaggagctattattcacgccctttgcttcagccccaatcgctactggctt
tgcgctgccactcaagaaagcgtcaagatctgggacctcgagagtaagtctgttgtgcag
gatcttaagcctgagaccactgccaccaagaaccagatgctttattgcactagcttgact
tggagcgctgatggcagtactcttttcaccggttacacggacggagcgatcagagtgtgg
gagatacgatactag
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