Zingiber officinale (ginger): 122028922
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Entry
122028922 CDS
T08725
Name
(RefSeq) beta-galactosidase 8-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00052
Galactose metabolism
zof00511
Other glycan degradation
zof00531
Glycosaminoglycan degradation
zof00600
Sphingolipid metabolism
zof00604
Glycosphingolipid biosynthesis - ganglio series
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122028922
09103 Lipid metabolism
00600 Sphingolipid metabolism
122028922
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122028922
00604 Glycosphingolipid biosynthesis - ganglio series
122028922
00511 Other glycan degradation
122028922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122028922
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
122028922
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122028922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
122028922
NCBI-ProteinID:
XP_042443832
LinkDB
All DBs
Position
1A:complement(115141831..115190559)
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AA seq
681 aa
AA seq
DB search
MVVLKSNLELPLFIFVVIVTTGIVSSSSSLSGLSSSGCAFHRRYGSSAACNRRFWISDDM
FWKDGNPFRIIGGDVHYFRILPQYWRDRLLRAKALGLNTIQTYVPWNLHEPEPKRWVFEG
IADIESYLKLAQELGFLVMLRPGPYICAEWDFGGFPAWLLAIEPPLKLRSSDKTFLAYVQ
RWWDVLFPKIAPLLYENGGPIIMVQIENEFGSYGYDKKYLHYLVALARKYLGNQTILYTT
DGGSRDTLDNGTIPEKGVFSAVDFSTGENPWPIFQLQKEYNAPGKSPPLSAEFYTGWLTH
WGEKIAETDANYTAAALEKILSRNGSVVLYMAHGGTNFGFYSGANTGQNESDYKADLTSY
DYDAPIKESGDVGNPKYEAIRRVIQKYSGVVLPRAPPDNKKLGYGLVDLHKIASFNEVLN
DIYDSTMVVKSEHPMTMETVGQMFGFMLYASKLPPRKRSSILKILKVHDRAQVFVSCGLD
KAGGHPIYIGVIERWSNRELLIPKISCSSNSSLLILVENLGRVNYGQYISDKKGILSNVF
IDGTALHGWQMFPIPLDRFSNFTTLNPIKQVSDLMTENISTGPGIYEGHVTINSAKQIKD
TFISFRGWNKGIAFVNDFNIGRFWPSLGPQCTLYVPAPLLREGENIVVILELHAPNPDFT
INLVKKPDFTCGTKSRRNDNY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgctgaagagtaacctcgagttaccgctctttatcttcgtcgtcattgtcacc
accggaatcgtctcctcctcgtcctccttgtctggcctctcctcctccggttgcgctttc
caccgtcgctatggctcttcggcagcctgcaatcggaggttttggatttcagatgacatg
ttttggaaggatggcaatccttttaggatcataggcggtgatgtgcactacttccgtatc
ctgccgcagtattggagagatagattgttgcgtgctaaagcccttggccttaacacaatc
cagacatatgttccgtggaatttgcatgagccagagcccaaaagatgggtatttgaaggc
atagcagacattgaatcctacttgaagcttgctcaggagctaggttttcttgttatgctt
cgacctgggccatatatatgtgcagagtgggactttggaggtttccctgcttggttactt
gcaatagaaccacctcttaaactcagatcatcagataagacattccttgcctatgtacag
agatggtgggatgttctttttcctaaaatagctcccctattatatgagaatggaggtccc
atcattatggttcagattgaaaatgagtttggatcatacggttacgacaagaaatatctt
cattatttagttgctttggctagaaagtaccttgggaatcagactatactgtatactaca
gatggcggttctagagacactctagataatggaacaatccctgagaaaggtgttttttca
gcggtcgacttttcaactggtgagaatccatggcctatatttcagttgcaaaaggaatat
aatgcccctggaaaatcacctcctctctcagcggaattctatacaggatggctcacccac
tggggagagaagattgcagaaaccgatgccaattatactgctgctgctttagaaaagatt
ttatctaggaatggttctgttgtactctatatggctcatggtggaactaattttggattt
tacagtggtgcaaacactggtcagaatgaatctgattataaggcagatcttacgtcctac
gattatgatgctccaatcaaggagtccggtgacgtgggcaatccaaaatatgaagcaata
aggagagttattcagaagtacagtggagtagttctgcctcgtgcccctcctgataataaa
aaattaggatatggcttagttgatctccataagattgcctcttttaatgaggttctcaat
gacatatatgattcaaccatggtagtcaaaagtgaacatcctatgacgatggagacagtt
ggccagatgtttggatttatgttgtatgcgtctaaattacctccaaggaaaagaagtagc
atcctaaaaattctgaaggtgcacgatagagcccaagtttttgtttcatgtggtttggac
aaagctggaggccatcctatatacattggtgtaattgaaagatggtcgaatagggaactt
ctgattcccaaaatctcttgttcctcaaatagcagcttacttattctggtggaaaacttg
ggtcgtgtaaattatggtcaatacatctctgataagaagggaatactgtctaatgttttc
atagatggcactgcccttcatggatggcagatgtttccaattccactagatagatttagc
aattttacgactctcaacccgatcaagcaagtttctgatttgatgacagagaacatttcc
actggaccaggaatttatgaaggccatgtcaccatcaattcagcaaaacaaatcaaagat
acatttatttctttccgtggttggaacaagggaattgcttttgtgaatgactttaatatt
ggaagattctggccttcacttggaccgcaatgcaccctttatgttcctgcaccattactt
cgagaaggagaaaatattgtggtcatcttagagttacatgcaccaaatcctgatttcaca
atcaacttggtgaagaaaccagacttcacttgtggaaccaagagtagaaggaatgataat
tattga
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