Zingiber officinale (ginger): 122029356
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Entry
122029356 CDS
T08725
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14-like
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122029356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122029356
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122029356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
122029356
NCBI-ProteinID:
XP_042444239
LinkDB
All DBs
Position
10B:10489135..10498583
Genome browser
AA seq
873 aa
AA seq
DB search
MTGKNTKQIPKGTKKGGRDKKKRHGPRLPSAVRKELEHLNADPNLEQSELEKDEFGEDVY
EYDEETPEEETRKNHRYDSVDNYEYELPKEFEDEDVPSEDEELDSEPSEKSDDDQENSRH
PRMLEDITGLPSMAFDGHQKKQIVVTDFQGDLNGKKISIHDLLDPLQQEPGYKNLRKKLH
KIETKPMTVQVPLPKEEREKLERKVVYYHTRKDMTKWEPLVKRNREAPTLHFDADVNLGF
STVEAIASEFEPRTEFEKKMALLVRDPEIVDAYNKDGARLLELNKINIEDVKEHQHRLAK
MRSLLFNHEMKSKRIKKIKSKTYHRILKKERLKVASAMEMDPEVAKENARKQEFKRAEER
MTLKHKNRSKWAQRILKRGLDIQDEGTRSAITEQLHQHALLTRKMNSIEDNSDDDDNSTD
DNDNDDSDELLSEKGKKNVSKLLNKAKESTLKALEDASVLPKSGVFALPFMERGLKKQQD
AVEEEARMALDEYDASLRQHEKGHDIKNPKSAKVSGRKVFGPLKDKLQKSHKRTKTFNDD
HNSDSEGGSDTIDHADVDEEVNNPAQNANLGPASDDDSENATHSIFKSFDDIVKEPGPKT
TFEVAIFASDSWKKINGENVVDAGSTKAAAIQNSQMLTHLPEPEDMDQDSDGDSEEKMVD
GFLSSSPKRDYELPSQADLVHQAFAGDDVEAEFEKYKLEHLNEECPEPEKPELIPGWGQW
TDIQQKRGMPSWMINEHKNAKRKREEALKKRKDASLKNVIISENVDKKAEKLLAKTLPFP
YTSEEVYEQSIRMPIGPDFNPAITAGTLNRPTVVKKPGVIIKPIQYEEVDPNDDPDQPRR
IVQKPKAQPKANKDNSARGKLKKMTSTKKKTKP
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaagaatacgaaacagatacctaagggtacaaagaagggtgggagggacaag
aaaaagaggcatgggcctcgccttccttcggctgtccgcaaggaactcgagcacctcaat
gctgatcctaaccttgaacaatctgagttggaaaaagatgaatttggagaagatgtctat
gagtatgacgaggaaactccagaggaggagacacgaaagaaccaccgctatgattctgta
gataattatgagtatgagctaccgaaagagtttgaggatgaggatgtgccttcagaggat
gaggaacttgatagcgaaccttctgaaaagtcagacgatgatcaggaaaacagtaggcat
ccgaggatgcttgaagatattacagggctcccaagcatggcttttgatggccaccaaaaa
aagcagattgtcgtgacggactttcaaggggatctaaatggtaagaagatcagtattcat
gatcttttggatcctcttcagcaggagcctgggtacaaaaaccttcggaagaaattgcac
aaaatagagacaaagccaatgactgttcaggttcctctgcccaaggaggaaagggagaaa
ctggagaggaaggtggtgtattaccataccaggaaagatatgactaaatgggagccattg
gttaaaaggaatagagaggctcctactttgcactttgatgcagatgtgaacttgggtttt
tcaactgtagaagcaattgcttctgaattcgaaccaaggactgagtttgagaagaagatg
gcattactagttcgtgatccagagattgtggatgcttataacaaagatggtgcaagactt
ttagagcttaacaagataaatattgaggatgtgaaagaacaccagcatcgtcttgctaaa
atgcgtagccttctttttaatcatgaaatgaagtcaaagcgtatcaaaaaaataaaatcc
aagacataccaccgtattcttaaaaaagagagattaaaggtagcttctgcaatggaaatg
gatcctgaagttgctaaagagaatgctaggaaacaagaatttaaacgagcagaggaaaga
atgacactgaagcataaaaaccgatcaaagtgggcacaacgaatcttaaagcgtggacta
gatattcaagatgaagggactcgatctgctataacagaacaactccatcagcatgcactt
ttgactaggaaaatgaattcaattgaagataatagtgatgatgatgataattctactgat
gataatgacaatgatgacagtgatgaactattatctgaaaaaggaaagaaaaatgtttcc
aaattgctaaataaagcaaaagaaagtacactcaaagctcttgaagatgcaagtgtgcta
cctaagtctggagtttttgcattgccatttatggaacgtggcttgaaaaaacaacaagat
gcagtggaagaagaagctcggatggcacttgatgaatatgatgcatcattgaggcaacat
gagaagggacatgatataaaaaatccaaaatcagctaaagtaagtggtagaaaagtcttt
ggacccctgaaggacaaacttcaaaaatcccataagagaacaaaaacattcaatgatgac
cataatagtgacagtgaaggtggttcagataccattgatcatgcagatgttgatgaggaa
gtaaataacccagcacagaatgccaatcttggacctgcatctgatgatgactccgaaaat
gccactcattctatattcaagagttttgatgacattgtcaaagaacctggtccgaagaca
acttttgaagttgcaatttttgcttcagattcttggaaaaagattaatggagaaaatgtg
gtagatgctgggagcactaaagctgcagcaatacagaattctcagatgcttacgcatcta
cctgagcctgaggatatggatcaagatagtgatggtgattctgaggaaaagatggttgat
ggatttttgtcttcaagtccaaagcgtgattacgaacttccatctcaagcggaccttgta
caccaagcctttgctggtgatgatgtggaagctgaatttgagaagtataaactggaacat
ctgaatgaagagtgtcctgaaccagaaaagccagaattaattccaggatggggccaatgg
acagacattcagcagaagagaggcatgccttcttggatgataaatgagcataaaaatgct
aagaggaagagagaggaggcacttaagaagaggaaagatgccagcctaaaaaatgtgatc
atttctgaaaatgttgataaaaaggctgagaaacttctcgcaaagactctgccttttcca
tacacctctgaagaagtttatgagcagagcattcggatgccaattggaccagattttaat
cctgcaataacagctggaacacttaatcggcccactgttgttaagaaacctggtgtgatc
ataaaacccatccagtatgaagaggtggatcctaatgatgatccagatcaaccaaggcga
atagtgcagaagccgaaggcacagcccaaggcaaataaagacaactctgctcggggcaag
ctcaagaaaatgacatcaacaaagaaaaagactaaaccttga
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