Zingiber officinale (ginger): 122029394
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Entry
122029394 CDS
T08725
Name
(RefSeq) formin-like protein 6
KO
K28090
formin
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122029394
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
122029394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
NNH2
Motif
Other DBs
NCBI-GeneID:
122029394
NCBI-ProteinID:
XP_042444294
LinkDB
All DBs
Position
10B:94339564..94349136
Genome browser
AA seq
1311 aa
AA seq
DB search
MALFRKLFHRKPPDGLLEISERVYVFDCCFATDVSKEDEYRFYIGSIVAQLQEQFLDTSF
MVFNFREGDSQSQISSILSEYEMTVMDYPRQYEGCPLLSMEMIHHFLRSSESWLSLSRQN
VLLMHCELGGWPVLAFMLAALLVYHKRYAGEWRTLDMIYKKAPHELMHLLLPLNPLPSQL
RYLHYISRRNTDSEWPPLDRGLTLDCVILRFIPDFYGTGGCRPLFQIYGQDPFLAADRAP
KVLFSTPKKSKLVRFYKQEDCELVKIDIHCHIQGDVVIECIGLEDDLEHEEMMFRVMFNT
AFIRSNILMLDRDAVDILWDVKDRFPKNFRVEVLLSEMDTSNSPPSLESMNVQKKGEFPV
ETFSEVKETFNNMNWLESKPDTASEVLQQIGSSKALQDKLDAVSPPKSGNDVILTELGPD
VLCEDALSSETTSARLLSSFPKRYSVPLHKISDSNAKNNVEMHGLQIPKKLPSQIKIISQ
RIPVSRSTPAFSSNSIPGSHPTVSRYHSASSDLGIMALLNDHTSDSSEVAHTTKFASALA
SISASGSTISSDSRQLRSSSLLTTSASCAKEGSLSPQRLSSAPQSTISASCSTKASLAPT
HCPPPQPLRVTSSESCPVPPPPPPKVTSLARLPIPSSPPRPPLLTKVTSLVHTPVPSPPP
PPLNRVHARKTEACVGHKPPFKSSSLEVPPSPAWKISESHASVLSIPSHHRHSVQSLTSI
PSPPPPPLKGTSSYPSFSTLKKTAASSVAHQVASAIIASKTPPNPPPPPLITLLSPNTDI
LPLRKGIDTSSVPSPPPPPCPISAIAMSALPRPPHTLSNNSGGFATKISAPSVPLPPAPP
NSLQSLTIPNSSAANGINFDAIPPPPPSGISAPSLEGKGRLPARTPNFRNLQPSQSSSKK
CNLKPLHWIKVARAAQGSLWAESLNTDEFSKSPEFDMSELESLFSAALPTPDARGASSRG
GRSTGPKSDKVHLIDLRRANNCEIMLTKVKMPLNDLMSSVLALDDSVLDADQLDNLIKFC
PTKEEMELLKGYDGDRENLGKCEQYFLELMKVPRVESKLRVFSFKIQFRSLVADLKGNLN
IVNSASQEIRSSVKLKRIMQTILCLGNALNQGTARGSAVGFRLDSLLKLTDTRARNNKMT
LMHYLCKVLKEKLPELLDFPKNLVSLEAAAKMQLKILAEEMQAINKGLEKVEQELTASEH
DGHVSQGFRETLKEFLVCAEAEVRALISLYSNVGRNADALALYFGEDPARCPFEQVVSTL
LNFVKMFTRAHEENCKRLELEKKKAQKEEVEKPKMSNSKKEQMRNSWCFHH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtttaggaagctctttcaccgaaagccaccggatgggctgctggagatttcc
gagagggtttacgtgtttgattgttgcttcgcaactgatgtctccaaggaagatgagtat
aggttctacattggaagcattgtggcgcaacttcaggaacaattcctagacacctctttt
atggtgtttaacttccgggagggagatagccaaagtcagatttccagtatattatcagag
tatgaaatgactgtgatggactatccacggcaatacgaaggatgcccattgctctccatg
gaaatgattcaccatttcttgaggtcaagtgaaagttggctctcattgtctcgacagaat
gtcttgttgatgcattgtgagctaggtggttggccagttctagcatttatgttggctgca
cttctagtttatcacaaacggtatgcaggagaatggaggacgttagacatgatttacaag
aaagcccctcatgagctgatgcacttgctattacctttaaatccactgccctcccaactg
agatacttgcactatatctcgagaagaaatactgactcagaatggcctcctcttgatcgg
ggtcttactttggactgtgttattcttaggtttattccagatttttatggaacaggtgga
tgcaggccattattccaaatatatgggcaggatccctttcttgctgccgatcgggctcca
aaagtgctattctcaacacccaaaaagagcaagttagtccgcttctacaaacaggaagat
tgtgaacttgttaaaattgatatacattgtcatattcaaggagatgtggtgatagagtgc
atcggtttggaggacgatctagaacacgaggagatgatgtttagagtgatgttcaatact
gcctttattaggtctaacattttgatgctagatcgtgatgcggtagatatcttgtgggat
gtcaaagatcggtttccaaagaatttcagagttgaggttctcctttcagagatggataca
tctaattcacctccatctttggagtcaatgaatgtccagaaaaagggggagtttccggtt
gaaacattttctgaagtgaaggaaacatttaacaatatgaattggctggaatcaaaacca
gatactgcgtcagaagttcttcagcagattggttcttcaaaggctcttcaagataagttg
gatgcagtttctccaccgaaatctgggaatgatgtcattctaacagaattaggtccagat
gtgctgtgtgaggatgccctttctagtgaaaccacaagtgcaaggttattatcctctttc
cctaagaggtattctgttccactccacaaaatttctgattcaaatgcaaagaacaatgtt
gaaatgcatggcctccagattccaaagaaacttccttctcagattaaaataatatcccaa
agaattccggtatctcggtcaactcctgctttttcttctaattctattccaggctctcat
ccaactgtttcaaggtatcatagtgcatcatcagatcttggaatcatggctctgctcaat
gaccatacttctgatagctctgaagttgctcacacaacaaagtttgcttcagcactcgca
agcatttcagcttctggatctaccatttcctctgattcacgacaactccgatcatcatca
ttattaacgacttcagcaagctgtgcaaaagaaggttcactgtcaccacaacgactgtca
tcagcaccacaatcaacaatttcagctagctgttcaacaaaagcctcactagcacctacc
cattgccctccacctcaaccacttagagtaacttcgtcggaatcttgtcctgttcctcct
ccacccccaccaaaagtgacttcacttgctcgtctacctatcccttcttctcctccacgt
ccaccactgctaacaaaagtgacctcacttgttcacacacctgtcccttctccaccacca
ccacctcttaatcgtgtgcatgctagaaaaactgaagcttgcgtcggtcacaaaccacca
tttaaaagctctagcttagaagtgccaccatcacctgcttggaagatatcagagtcacat
gcttctgttctttctattccttctcaccatagacattctgttcaatcactaacatcaatt
ccttctccacctcctcctcctttgaaaggcacatcatcgtacccttccttttcaaccttg
aaaaaaactgctgcttcatcagttgcacatcaggtagcctcagcgatcatagcaagtaag
acaccacccaacccccctccaccacctttgattaccttgttgagtcctaataccgacatt
ttgccactgagaaaaggaattgatacttcttctgttccttctccaccacctcctccatgc
cctatctcagcaattgcaatgtcagcactacctcgaccacctcacacattatcaaacaat
tctggtggttttgctaccaaaatatcagctccatctgtaccacttcctcctgcacctcca
aattccttgcagagccttactattcctaactcttctgcagctaatggaattaactttgac
gcaatacctccccctccccctagtggcatcagtgctccttcattagaggggaagggacgg
ctccctgctagaactcctaatttcagaaatttgcagcctagccagtcttcatcaaaaaag
tgtaacttgaagccattgcattggattaaagtagcacgagcagcacaaggaagcctatgg
gctgagtcactaaacacagatgaattttctaagtcaccagagtttgatatgtctgaattg
gagagtcttttttcagcagcactgccaacacctgatgctcgaggtgcaagttccaggggt
gggcgttccactggcccaaaatctgacaaagttcatctgattgatctcagacgggctaat
aattgtgaaatcatgcttaccaaggttaagatgccattaaatgatttaatgagttcggtt
ctcgcccttgatgattctgttttagatgctgaccagctggataacctcataaagttttgc
cctacaaaggaggaaatggaactactcaagggttacgatggagacagagaaaatttaggg
aaatgtgagcagtatttcttggagctgatgaaagtccctcgagtggaatctaagttaaga
gtcttctcgtttaaaatccagtttcgctccctggttgctgatcttaaaggcaacctgaac
atcgtcaattctgcttcacaagagatcagaagttctgttaagttgaaaagaatcatgcag
acaattctgtgtttgggaaatgcattaaaccaaggaaccgccaggggttctgcagttgga
ttcagattggatagccttctcaaactgacagatacacgagcacgtaacaacaagatgacg
cttatgcattatctgtgcaaggttcttaaagagaagctacctgaacttcttgactttcca
aaaaatcttgttagcttggaagctgcagcaaagatgcagttgaagattttggccgaagaa
atgcaagcgataaacaaaggccttgagaaggtcgaacaggaactaacagcatctgaacac
gatggtcatgtttcgcaaggtttccgtgagacgctgaaggagtttttggtttgtgccgaa
gcagaagttagagccttaatttctctttattcgaatgtgggtaggaatgctgatgcatta
gctctttacttcggagaagatcctgcacggtgtccattcgagcaagttgtctcgacgctt
ctcaactttgttaaaatgttcacgcgtgcccacgaagagaactgcaaacgactagagttg
gagaagaaaaaggcacagaaagaagaagtcgagaagccaaagatgtctaattcgaagaaa
gagcagatgcgaaatagttggtgctttcaccattag
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