Zingiber officinale (ginger): 122029403
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Entry
122029403 CDS
T08725
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00510
N-Glycan biosynthesis
zof00513
Various types of N-glycan biosynthesis
zof01100
Metabolic pathways
zof04141
Protein processing in endoplasmic reticulum
Module
zof_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
122029403
00513 Various types of N-glycan biosynthesis
122029403
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122029403
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GFIT
Motif
Pfam:
Ribophorin_I
SPATA1_C
Motif
Other DBs
NCBI-GeneID:
122029403
NCBI-ProteinID:
XP_042444303
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Position
10B:91120985..91132348
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AA seq
612 aa
AA seq
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MATSSRFAFFLFCLSLLYSTALSDLVISRVDRRVDLTSHVVRILSSLKVENGGNEIASEV
LLAFPNMQAKNLAAIKTFYSEGKGKEKGSSVSLPTTLVEPKGMPQELTFYSVSLPKGLGK
GGAITLDVLSVFTHSLQPFPEEITQADVQLVLYQDSAYYLSPYKVKMQTLGIRLPGGRVE
SYTKHPNSKLVDSEIRYGPFEKLPAFSYSPIVLHFENNNPFAVAHELLREIEISHWGNVQ
VTEHYTLVHGGALTKGGFSRLDYQARPAIRGVSSFNHLIFRLPPRAHSIYYRDEIGNIST
SHLWGDSRKTQLEIEPRFPIFGGWQTSFTVGYGLPLQDFLFKLDGKYMLNITFGSPMDEV
VIDNLIVKIVLPEGSKGIIAAVPFPTKQAEEIKYSHLDIVGRPVLVLEKNNVVPEDNIYF
QVYYQFSKISLLREPMMLISGFFLLFVACIVYIHTDMSISKSSASYIAKIQSEEVQATVQ
QVLNIINQCLAVHDKLEASLRDLSRTGDVQSCKTLRRTADAQLKELVKELKPLTTFLHHS
PQASHILPKVEELIAKEKDLQDKMMLKHSTVVDCFEKKYSGKDIENRIAPQQQKLTVLRQ
EMDDLHEFLDEI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgtctagattcgccttcttcctcttctgcctgtcactcctgtactctacc
gcgctctccgaccttgtgatctcgagagtcgatcgacgggtggatttgacttcccatgtt
gtacggatattgtcctcgttaaaggtagagaatggtggtaatgaaattgcatcagaagtt
ttgctggcatttcctaatatgcaagcaaaaaacttggcagctattaaaacattttatagt
gaaggaaaaggaaaagaaaagggttctagtgttagtcttcctactacactagttgaacca
aaaggaatgccccaagagttgactttttattctgtgtccttacctaaaggtttaggaaag
ggaggagctattactttggatgtgctttctgtattcactcattctctgcaaccatttcct
gaagaaattactcaagctgatgtgcaacttgtactctatcaggatagtgcctactatcta
tctccttacaaagtgaaaatgcagactcttggtattagattgcctggtggaagagttgaa
tcttacacaaaacatccaaattcaaaacttgttgattcagaaattagatacggtccattt
gaaaagcttcctgccttctcctactctcctatagttcttcattttgaaaataataatcct
tttgctgttgcacatgaattgttacgtgagattgagatttctcattggggtaatgttcaa
gttactgaacactatactcttgttcatggaggtgccctaacaaagggagggttttctagg
ctcgactatcaagccagaccggcaataagaggggtttcatcgtttaatcatttaattttt
agattgccaccaagggcacattctatatattacagagatgaaattggaaacatttcaacc
tcacatttgtggggtgattctagaaagacacaactagaaatagagccaagatttccaata
tttggtggttggcaaacatcattcactgttggctatggtttaccattgcaagattttcta
ttcaagttggatggaaagtatatgctcaatattacatttggcagtcctatggatgaggtt
gtcattgacaatctcattgtaaagattgtccttccagaaggttcaaaaggaattattgct
gctgttccctttcctacaaagcaagcagaagagattaaatattcccaccttgacatcgtt
ggaaggcccgttttagtcttggaaaagaataatgttgttccagaagataacatctatttc
caggtctactaccagttcagcaagatctcattgctaagggagccaatgatgctaatttct
ggcttcttcctcctttttgttgcttgcattgtttacattcacactgatatgtcaatctcg
aagtcttctgcgtcatatattgcaaaaattcaatcagaggaggtgcaagcaacagttcaa
caggttcttaatatcatcaaccagtgtttagcagttcatgacaagctggaggcctcacta
agagatctctcaaggactggagatgtccagtcttgtaaaacacttcgtaggacagctgat
gcacagctcaaggaattggttaaggagttgaagccattgacaacatttttacaccattct
cctcaggcttcccatatattaccaaaggtggaggagctgattgctaaggagaaagacttg
caagacaagatgatgctgaaacactccaccgtggttgattgttttgaaaagaagtacagt
ggaaaagatatagagaaccgcattgctcctcagcagcagaaattaactgtcctgaggcaa
gagatggatgaccttcacgagttccttgatgaaatctaa
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