Zingiber officinale (ginger): 122029471
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Entry
122029471 CDS
T08725
Name
(RefSeq) FH protein interacting protein FIP2-like isoform X1
KO
K21919
BTB/POZ domain-containing protein KCTD9
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122029471
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122029471
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Gene cluster
GFIT
Motif
Pfam:
Pentapeptide
Pentapeptide_4
BTB_2
Pentapeptide_3
BTB_3
Motif
Other DBs
NCBI-GeneID:
122029471
NCBI-ProteinID:
XP_042444394
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Position
10B:1149225..1159416
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AA seq
308 aa
AA seq
DB search
MEPGSPWPPSQVFLNVGRSIIPGGKKYTTTIDTLTHREPDSMLAAMFSGRYTVSTDDKMG
MIFIDRDGKHFRHILNWLRDGIIPMLQDSDYQELIREAEYYQLLGLIENINASLCNRKDK
DAPVVELTRKEVIQIIQSEKVRFRGVNLSGLDLSKLDLSFVDFSYACIQKTNFSRANLNK
AKFGDAEAGGSIFEDANLRECELIGADLHQAKLDRANLQSANLQDACLTQCSLCDADLRS
AHLQSAKLSGANLQGANLEGANLKGAKLNSANLQDANLQRAYLREVDLRDSQLEGAKMGG
ANLLGVIR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggctctccgtggcctccgtcgcaagtcttcctcaacgtaggtcggtcgatc
attccagggggtaagaaatataccacaacaattgatacactcacgcaccgtgagcctgat
tccatgttggcagcgatgtttagtgggcggtatacagtttctactgatgataaaatggga
atgatatttattgatagagatgggaagcattttaggcatatactaaattggctaagggat
ggtatcattccgatgcttcaagactctgactaccaagagctgatacgagaggcagaatac
tatcagttacttggattgattgaaaatattaatgcaagtctgtgtaatagaaaagataaa
gatgccccagtggttgaattaacacgtaaagaagtcatccaaatcattcaatctgaaaaa
gtgaggtttcgaggtgtgaacctttctggtcttgatctctctaagctggacctatcattt
gttgatttcagttatgcctgcatacagaaaaccaatttttcaagagctaatctcaataag
gctaagtttggggatgctgaagcagggggttcaatcttcgaagatgcaaacttgcgtgaa
tgtgagcttattggagccgaccttcatcaagctaaattggatagagctaatcttcagagt
gcaaatcttcaagatgcatgcttaactcaatgcagtctctgcgatgcagaccttcgttca
gcacatttacagagtgcaaaacttagtggtgcaaatctccaaggtgctaatctggaagga
gcaaatctgaagggtgccaagttgaatagtgcaaatttgcaggatgccaatcttcaacgg
gcttaccttcgagaagttgatttgcgtgattctcaacttgagggagctaagatgggaggc
gctaatcttcttggagttatcagatga
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