Zingiber officinale (ginger): 122029546
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Entry
122029546 CDS
T08725
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122029546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122029546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122029546
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122029546
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122029546
Exosomal proteins of other body fluids (saliva and urine)
122029546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
DUF3675
Synaptobrevin
DUF2116
Motif
Other DBs
NCBI-GeneID:
122029546
NCBI-ProteinID:
XP_042444511
LinkDB
All DBs
Position
10B:93290..94517
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AA seq
313 aa
AA seq
DB search
MNNLITKSFYSYADLKKEVLKDLESGGSEGEASIEMEAAGADGHLYQFFEEAEVVKEEMA
SIRQLLERLQAANEESKLTHKPEALLRLRERINGDIVQVLKTARAIRGRLESMDRSNAVN
RRLSGCREGTPVDRTRTAVTNGLRKKLKEIMMEFQALRQRMMAEYRETVERRYFTLTGEA
ASEEVIERIIAGGESEGMMRKAVLEQGRGTVAAAVQEIQDRHDAAKEVERSLLELHQVFL
DMAVMVEAQGEQMDDIEHHVANAAHYVKDGAKELKCAKEYQRSSRKWLCIAIIFLLILVL
VVVIPIAASFKHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcatcactaaatccttctacagctatgccgatctgaagaaggaggtcctc
aaggatctcgaatccggcggcagcgagggcgaagcctccatcgagatggaggccgccgga
gctgatggccacctataccaattcttcgaggaggcggaggttgtgaaggaagagatggcg
tccatccgccagctccttgagcgtctccaggccgccaacgaggagagcaagttgacccac
aagccggaggccctcctccgcctccgcgagcggatcaacggcgacatcgtccaggtgctc
aagacggctcgcgccatccgcggtcgcctagagtccatggatcgctccaacgctgttaac
cggcggctgtccggctgccgggagggcacgccggtggaccggacccgcaccgccgtcacc
aacgggctgcggaagaagctcaaggagatcatgatggagttccaggcgctgcggcagaga
atgatggcggagtatcgggagacggtggagaggcggtacttcacgctgacgggagaagca
gcgtctgaggaggtgatcgagcggatcatcgccggcggggagagcgaggggatgatgagg
aaggcggtgctggagcaggggcgggggacggttgccgcagcagtgcaggagattcaggac
cggcacgatgcagccaaggaagtggagcggagcctgctggagctgcatcaggtgttcctg
gacatggcggtgatggtggaggcgcagggggaacagatggacgacatcgagcaccacgtc
gccaatgccgcccactacgtgaaggacggcgccaaggagctcaagtgcgctaaggagtac
cagaggagcagccgcaagtggctctgcatcgccatcatcttcctcctgatacttgtcctg
gtggttgtcattcccatcgccgccagtttcaaacattcttag
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