Zingiber officinale (ginger): 122029602
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Entry
122029602 CDS
T08725
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122029602
03036 Chromosome and associated proteins [BR:
zof03036
]
122029602
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122029602
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122029602
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122029602
microRNA pathway
RISC loading complex
122029602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122029602
NCBI-ProteinID:
XP_042444598
LinkDB
All DBs
Position
10B:complement(5506644..5510454)
Genome browser
AA seq
1020 aa
AA seq
DB search
MEEAKDDGKAPSNPMEERKLMELCNPSHHHHRHPLHGASCHNTRRYQAAAAYPALLPLPF
TLPLPLPLPLPPPLLLHIPPIASLPQGINIPKPKAHIHKALWKEKPVCDGKLEAKVAVLP
LSPEIKVIKPQIDSVLAQKSSQIDEKCMGFDQKSLLDLQALVATKRPDSGGGEGSTIHLL
ANHFLVQFDPSQRVYHYDVNISPRPSREIARMIKRKLVEDNSDVLSGALPVFDGRKNLYS
PIEFQEHKLEFFVSLPIPVTRCLPNQNGSLIGKVKSKLFRVNIRLTSKLSGEDLDKFLKE
EKDCVPLPQDFLHALDVVLRENATENCIQMERSLYSNTMGGAKDIGGGVVGMRGFFQSLR
PTKQGLALNVDFCVTAFHESIGVIPYLQKRCDFLRDLSQRKTRGLIGEEKNEVEKALKNI
RVFVCHRETDQRYRVYGLTDEVTENLKFRDRDGKYLMLVDYFRDQYNHDIQFRNLPCLQI
SKSKPCYLPMELCMVCEGQKFLGKLSDEQATRILKMGCQRPCERKEIINNVMGGRAGPTS
GHYADQFQLQVSREMTQLCGRILEPPKLKLGDGGLVRDVTPSRYDRQWNFLDSHVAEGCH
ITRWAVVSFGGTPEQRSCIPKFINQLSYRCEQLGIFLNKKTVISPIFEQMQVLNNVPVLE
SKLRKIHDASGNLQLLICIMEKKHKGYADLKRISETVIGVISQCCLYSNLTKLTSQFLAN
LSLKINAKLGGCNVALYNTLPCQIPTIFSEDDPSIFMGADVTHPHPLDDVSPSVAAVVGS
MNWPAANKYTSRMRSQTHRQEIIEDLADMVGELIEEFFLSGNKLPSRIIFFRDGVSETMF
HKVLKEELRAIRVACLRFLNYKPTITFIVVQKRHHTRLFFNEKKASTGQFFDENIPPGTV
VDTVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENQFKSDEVQKLIHNLCYTFVRCTK
PVSLAPPVYYAHLAAYRGRLYLDRSDSTAFTRQTLSRAGPLPTVPLPKLRDNVKKLMFYC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcaaaggatgatggtaaagcaccaagcaacccaatggaagagaggaagctg
atggagctgtgcaatcctagtcaccatcatcatcgccatccactccatggtgcctcatgc
cacaacaccaggagatatcaggctgctgcagcgtacccagctttactaccacttccattc
accttgcctttgcctttgcctttgcctttgcctcctcctctcctccttcatatccctcct
atcgcgtccctcccgcagggcatcaacatccccaagccgaaagctcacatccacaaagcc
ttgtggaaggagaagcccgtttgcgatggaaagttggaggccaaggttgctgtcttgccg
ctctctccagaaatcaaggtgatcaaaccacaaatcgactcagttcttgcacaaaaaagc
tcccaaatagatgaaaaatgcatgggctttgatcaaaagtctctgcttgatttacaagct
ttggttgccaccaagaggcctgattcgggaggtggagaggggtctacaattcacctccta
gcaaatcacttcctagtgcaatttgacccctcgcaaagagtctaccattatgatgtgaat
atatccccacgtccctcgagggaaattgctagaatgatcaagagaaaactcgtagaagac
aattcggatgtgctttcaggtgctttgcccgtttttgatggcagaaagaacttgtacagt
ccaattgagttccaagaacacaagcttgagttctttgtaagtctccctattcccgttacc
aggtgcttgcctaatcaaaacggaagcttgattgggaaagtgaagtctaaattattcagg
gtgaacataagattaacttccaagctcagcggtgaggacttggataaatttttgaaggaa
gagaaggactgtgtgcctctgccgcaagactttcttcatgcattggatgttgtcttgcgc
gagaatgcaacagagaattgcatccagatggagaggtcgttgtactcgaacaccatgggc
ggagcaaaagacattggtggtggagttgtgggtatgagaggcttctttcaaagcctcaga
ccaacaaaacaaggccttgcgcttaatgttgatttctgcgtgactgcctttcatgagagc
atcggtgtcatcccgtaccttcaaaagcgttgtgattttctacgagatctctctcagagg
aagactaggggattgattggagaagaaaagaatgaagttgagaaggctttaaagaacatt
agagtctttgtttgccaccgagaaacagatcagagatatcgggtttatggcttgacagac
gaagtgactgagaatctcaagtttagagatagagatgggaaatacttgatgttggttgat
tatttcagggaccagtataatcatgacatacaattcagaaacctcccatgcttacaaatc
agcaaaagtaagccatgttatctgccaatggagctatgcatggtttgcgaaggccagaag
ttccttggaaaactttcagatgagcaggcgacaaggattctcaagatgggctgccaacga
ccctgtgaaaggaaggagatcatcaacaatgttatgggaggaagagcaggcccaacaagc
ggacattatgcagatcaattccagcttcaagtttctcgcgagatgacacaactctgcgga
agaattcttgagcctccaaagctcaagcttggtgatggtgggcttgttagagatgtaaca
ccttcacggtacgatcgacaatggaactttcttgatagtcacgtagctgaaggctgccat
attacaagatgggctgtggtaagttttggtggaaccccagagcagagatcctgcattcct
aagttcataaaccagctctcttatagatgtgaacagcttggaatattcttgaataagaag
acagtcatcagcccaatttttgaacagatgcaagtcctgaacaatgttcctgttctcgaa
agcaagctcaggaagattcatgatgcttcggggaatttacaactacttatctgcataatg
gagaagaaacataaaggttatgctgatctgaagagaatttccgagactgtcattggtgtc
ataagtcagtgttgcttatattccaacctaaccaagctcacttcacaatttctagcaaat
ttatccctaaagatcaatgctaagcttggtggctgcaatgtagcattatacaacaccctt
ccttgccaaattccgacaattttctctgaggatgacccctcaatcttcatgggtgccgat
gtcactcatccacacccactggatgatgttagtccatctgttgcagctgttgttggcagc
atgaattggccggcagcaaataaatacacatcgaggatgagatcccaaactcatcgccaa
gagattatcgaagacctagctgatatggttggtgagctaattgaggagttctttttatca
ggtaacaaacttcctagcagaattatcttcttcagggatggtgtaagtgagactatgttt
cataaggtgctaaaggaagagctccgggccattagggtggcttgtttgagatttctcaat
tacaagccaactattactttcattgtggtccaaaaaaggcaccacactaggctctttttc
aatgaaaagaaggcttctaccggccagttcttcgacgaaaacatacctcctggaactgtt
gtggatactgtgattacgcatccgagggaatttgatttctacctgtgtagtcattggggg
atgaaggggacaagtaggccaacccattatcatgttctatgggacgagaaccagttcaag
tctgatgaagtgcagaaactgatacacaatctttgttacacatttgtcaggtgcaccaaa
cctgtatcgctcgccccgcccgtgtattatgctcatctagctgcatacagaggcagattg
tacctcgacaggtcagactctactgcattcacaagacaaacgctatcgagagctggacct
ctaccgactgtgccactgcctaagcttcgagacaatgtcaagaagctaatgttctactgc
tga
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