KEGG   Zingiber officinale (ginger): 122029752
Entry
122029752         CDS       T08725                                 
Name
(RefSeq) protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122029752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122029752
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122029752
 Complex B
    122029752
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 122029752
NCBI-ProteinID: XP_042444808
LinkDB
Position
10B:complement(94201160..94222804)
AA seq 947 aa
MGSSQKKIPFHRHREAEEARKKREDDEAARVYAEFVESFKGDNAPGSKTFVRGGVIDPND
RLKANSEGGKSKDGVSVPKKGSRYVPSFLPPPSHGRELEKKDDEKPREKEKGKTRHIDKF
LEELKFEQELREKRNQEREGRHTDTTAPVSHFDELPDDFDPSGKFPGSFDDGDPQTTNLY
VGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE
MQGVVVYEYELKIGWGKSVALPAQALPAPPPGHMAIRNKEGNTVIISGPDGAPVTSQSSE
LVLTPNIPDIVVVTPEDDHLRHVIDTMALYVLDGGCAFEQAVMERGRGNALFDFLFDLRL
KEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPSLPANRSPEHDKESASTFAAG
RSRRVDLERALTDPQRDEFEDMLRALTLERSQIREAMGFALDNADAAGEVVEVLTESLTL
KETPVPTKVARLMLVSDILHNSSAPIKNASAYRTKFEANLPDIMESFNDLYRSITGRITA
EALKERVLKVLQVWADWFLFSDAYLNGLRATFLRSGNSGVFPFHSLCGDAPEIENQGNQE
EGYEGSKSNQDAALAVGKGAATKELMGLPLPELERRCRHNGLSLCGGREMMVARLLNLEE
AERERGLEQDDHTKYGQNQFYRNIRDESIRNVNAGSRETNSDRETSPTILPFAREVTTRH
DRGSGSTESAVALDHKAKSDPVLASKWNREDGGSDEDKSSPDLGLGYSSESENAGDFLKS
GAEVDTDKAVHIHPDNSLNEEKRQKLRRLEVAVVEYRESLEERGLRSAEEIDRKVAVYRR
QLEFEFGLSDTTDDQGSKKSSSERRSSERREKSDDVYDSSRKRRRSRSISPERKDRTRER
HREKDRSFGSEIGREGPREKNGSKERDDHHNRDKTREREKDRRRNDK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgggatcttcccagaagaaaatcccgttccatagacacagggaagctgaggaagcaagg
aagaagagagaagacgatgaagctgcacgtgtttatgccgaattcgtagagtcctttaag
ggtgataatgctccaggttcgaagacttttgtcagaggaggagtcattgatcccaatgac
aggcttaaggccaattcagaaggtggaaagtccaaagatggggtatctgttccaaagaag
ggaagtaggtatgtgccatcttttctgccacctccgtctcatggaagagaacttgagaaa
aaggatgatgagaaacctagggagaaagagaaggggaaaacacgtcatattgataagttt
ttggaggagctgaagtttgagcaagaactaagggagaagcggaatcaagagcgtgaaggg
cggcatacagatactactgctcccgttagccattttgatgagttgccagatgattttgat
cctagcggcaagtttccaggttcatttgatgatggagatccacaaacaacaaatttatat
gttgggaatctctctcccaaggtggacgagaactttcttttgagaacatttgggaggttt
ggacccattgccagtgtgaaaataatgtggccacgaacagaagaagaacggagacggcag
agaaattgtggctttgttgctttcatgaatagagctgatggacaagctgccaaagatgaa
atgcaaggagtggtggtttatgaatatgaattgaagattggctggggtaaatcagtagct
cttccagcgcaggcactgcctgctcctccacctggtcacatggctatcagaaataaggag
ggcaacactgttataatatctggacctgatggtgcaccagttactagtcaaagctccgag
ttggttcttaccccaaatattccagacattgtggttgtgactcctgaggatgatcacctt
cgtcatgtgatcgacacaatggcattgtatgttcttgatggtggatgtgcttttgaacaa
gctgtaatggagcggggccgtggaaatgcactttttgactttctctttgatcttcgatta
aaggaacacacatactatgtctggagactttactcctttgctcagggtgacactcttcag
cggtggcgaacagaaccatttatcatgattactggcagtgggagatgggttcccccttct
ttgccagctaatcgaagtcctgaacatgataaagaatctgcttcaacttttgcagctgga
agaagcaggcgagtcgatttggagcgggcattgacagatcctcaaagagatgagtttgaa
gatatgctgcgggccttgaccttagagagaagtcagattagagaagctatgggatttgca
ttggataatgctgatgctgctggagaggtagttgaagttctcacagaatcattgacttta
aaagaaacacctgtaccaacaaaagttgcaaggcttatgctggtgtctgatattctccac
aacagcagcgctccaattaagaatgcttctgcatatcgtacaaagtttgaagctaacctt
cctgatataatggagagctttaatgacttatatcgcagcattactggaagaatcactgct
gaagctttgaaggaacgagttctgaaggttcttcaagtatgggctgattggtttctcttt
tccgatgcgtatttgaatggattgagagcaacttttcttcgttctgggaattcaggtgtt
ttcccatttcactctttatgtggcgatgcaccagagattgaaaaccaaggtaatcaggaa
gaaggatatgagggaagtaagtctaaccaggatgctgccttggctgtggggaagggagca
gcaacgaaagaactaatgggacttcctcttcctgagctcgagaggcgttgcagacataat
ggtttatctctatgtggaggaagagagatgatggttgcaagattgctgaatttagaagag
gccgaaagagagaggggcttagaacaagatgatcatacaaagtatgggcaaaaccagttc
tacagaaacatacgagatgaaagtattcggaatgttaatgctgggtcaagagaaactaat
agtgatagagaaacgagccccacaatccttccgtttgccagggaagtgactacacgacac
gacagaggctctggttcaactgagtcagcagtagctctggaccataaagcaaaatctgat
cctgttctagcttccaagtggaatcgagaagatgggggtagcgatgaggacaagagttct
cctgatttgggtttaggctattcatctgagagtgagaatgctggggattttctcaagtct
ggtgctgaagtggacacagacaaggcggtccatattcaccctgacaattctttgaatgaa
gagaagagacagaaattgcgacgtctagaagttgccgttgtggaataccgtgaatctctt
gaggaacgaggtctccgtagtgctgaagaaatagataggaaggtagcagtttatcgtagg
caacttgagttcgaatttggtttatctgatactacagatgatcaaggaagcaagaaaagt
tcatcagaaaggagatcctctgaaaggagagagaaatcggatgatgtctatgattcaagt
aggaaacgacgtcgcagccggagtatcagtcccgaaaggaaagatagaacccgagaaagg
catcgtgaaaaagacaggtcatttggaagtgagattgggagggaaggtccacgcgagaag
aacggaagtaaagagagggatgatcatcacaaccgtgataagacaagggagagggagaaa
gataggaggagaaatgataagtga

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