Zingiber officinale (ginger): 122029978
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Entry
122029978 CDS
T08725
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122029978
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122029978
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122029978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
Prok-RING_4
zf_RING_Vps8_fungal
Prok-RING_1
zinc_ribbon_16
PHD_NSD
PHD
zf-RING_Vps41
RINGv
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122029978
NCBI-ProteinID:
XP_042445055
LinkDB
All DBs
Position
10B:complement(46418622..46425755)
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AA seq
274 aa
AA seq
DB search
MENGEESGAGSKRSTAEANPDPDPPPTSPSRTPFTSLSQVDADLALARALQEQERAYAML
RMNGADGSDYESSDAGSYDYEEEDGDDVGDEADHVIEEGGSIEGSDYGEDAFDANDPVVD
PEDFENDEEFARALQDAEEREVAVRLMSLAGLNEWVSDDHGDHGGNSQDAWQEIDPDEYS
YEELVALGEVVGTENRGLSFETIAALPSVNYKAENVQDNNAEQCVICRLEYEDGDSLVVL
SCKHKYHSECINKWLQLNKACPICNTEVSTSGSK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggggaagagagcggcgccggaagcaagcggtccaccgccgaagccaacccc
gaccctgatccacctccgacctctccctctcgcactcccttcaccagcctcagccaggtc
gatgccgacctcgccctcgcccgcgccctccaagaacaggaaagggcgtacgcgatgctg
aggatgaacggcgctgatggcagcgattacgagagttctgacgcaggcagctatgattac
gaggaggaggatggggatgatgtgggagacgaggcagaccatgtgattgaggagggaggg
agcatcgaggggagtgactacggagaggacgccttcgatgccaacgatcctgttgtagat
ccggaggatttcgaaaacgatgaggagtttgcaagggctctgcaagatgccgaggagcgg
gaggttgctgttaggttgatgtcccttgccggattgaatgaatgggtgtccgatgatcat
ggtgaccatggcggtaattctcaggatgcttggcaagaaattgatccagatgaatactca
tatgaggagctagttgcactgggggaagtagttggaactgaaaacagaggcctttctttc
gaaacaattgctgctctgccttcagtcaattacaaggcagaaaatgtgcaagataataat
gctgaacaatgtgttatatgccggctggaatatgaggatggtgattcattggtggtgctt
tcttgtaagcataaataccattctgaatgtattaacaagtggctccaactaaacaaggca
tgccctatctgcaataccgaggtctctacatcagggagcaagtga
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