Zingiber officinale (ginger): 122029979
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Entry
122029979 CDS
T08725
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122029979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122029979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122029979
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122029979
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122029979
Exosomal proteins of colorectal cancer cells
122029979
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Voldacs
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
122029979
NCBI-ProteinID:
XP_042445056
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Position
10B:complement(31974061..31983021)
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AA seq
438 aa
AA seq
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MAVNWLPPVSLTASGRPVFVPGEVERCLLPAVDLEPGENPSLSPLLSGLLVLTSHRLLWI
DETSSSGFALPFAAVVHAYPPKKSIRSMFASPRIRIQVSASPDGRVVAGGTRSEMITVVL
RGKNDPDVFYGRLLEVLRSRQWEVSVEAEKRDLESVSAGTSTTTAAARVRMPVVGVSGIL
RKEQELWESTDKSLQEAFQDLNALMSKAKEMVQLAEKMRLKLLSGPSAQGNPNEEEMGSK
QDMQDWLLSVGIASPVTKESAGALYHQQLARELADFVKLPLEKAGGMIALIDVYCLYNRA
RGTALISPEDLLQACTLWEKFDVSVMLRKFDSGVMVIQNKAQRDEEVFARIVSLAQKPEA
LRTGISPSDAALTLGIAPALAKEQLLTAESIGLVCRDVSPDGFRFYINLFREIDTNDIYL
IKKPGPFHAWLSAISLSG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaattggctgcctccggtatcactcaccgcctccggccgcccggtcttcgtc
cctggcgaggtcgagcgctgcctcctccccgccgtcgacctcgagcccggggagaacccc
tccctctctcctctcctctctggactcctcgtcctcacttcccaccgcctcctatggatt
gacgagacctcctcctctggatttgctctccccttcgctgccgtcgtccacgcctacccc
cctaagaagtccatccgcagcatgttcgctagccccaggatccgcatccaggtctcggcg
tcgcctgatgggagggtagtcgcgggcggcactcgttccgagatgattacagtggtgctg
agagggaagaacgatcctgatgtgttctacggccggctattggaggtgctgcgatcgagg
cagtgggaagtttcagtggaggcggaaaagagggatttggaatcagtatcggcgggaact
tcgaccaccacagcggcggctagggtgagaatgccagtggtcggggtatcagggattttg
agaaaagagcaagaattgtgggagagcacagataaaagcttacaggaggccttccaggat
ctcaacgctctgatgagtaaggctaaggaaatggtgcaactggctgagaaaatgaggctg
aagttattatcaggtccaagtgctcagggaaaccctaatgaagaagagatgggttctaag
caagacatgcaagattggcttttaagtgttggtattgcatctccagttacaaaggaatcg
gctggtgctttgtaccatcaacaacttgctcgggagcttgcagattttgttaagctgcca
cttgagaaggctggaggaatgattgcattgatagatgtctattgtttatataatcgtgct
agaggaactgcactgatttcacctgaggatcttctgcaagcttgcaccctttgggagaaa
tttgatgtctctgtaatgcttaggaagtttgatagtggtgtaatggttattcagaataaa
gctcagagggatgaagaggtctttgcaaggatagtttcccttgcacaaaagccagaggca
cttagaacaggaataagcccgagtgacgctgctttgaccttaggaattgcacctgctctt
gccaaagaacaactgctgactgctgaaagcataggccttgtatgcagagatgttagtcct
gatggcttccgtttttatatcaacctcttcagggagattgatacaaatgatatttacttg
ataaaaaaacccggaccttttcatgcatggctatctgccatatctttgtctgggtag
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