Zingiber officinale (ginger): 122030003
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Entry
122030003 CDS
T08725
Name
(RefSeq) tryptophan synthase beta chain 1-like
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122030003
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122030003
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122030003
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
122030003
NCBI-ProteinID:
XP_042445091
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Position
10B:complement(37884628..37888439)
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AA seq
470 aa
AA seq
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MTASATLALGNPSLDLAKPLPSSFLGVWIHPQSGLLRRVGFASPSSGLAVSCTMTKEVTA
VEASKYENPGFGLRPDSFGRFGRFGGKYVPETLMYALTELEEAFWALSKDEEFQRELEGI
LRDYVGRESPLYFAERLTEHYRRSDGQGPHIYLKREDLNHTGAHKINNAVAQALLAKRLG
KKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMKLLGAEVRAVHSG
TATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGG
KPDVLVACVGGGSNAMGLFHEFVDDRDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGA
MSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYFSVTDKQALEAFKQLSRL
EGIIPALETSHALAYLEDLCPTLPDGSKVVVNCSGRGDKDVQTAIKHLHL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttccgcgactttggcgctcggaaaccctagcctcgacctcgccaaaccgttg
ccgtcgtcctttctcggcgtctggatccatccccaatctggattgttgcgccgagtcggc
tttgcgtcgccgtcgtccggacttgctgtctcctgcaccatgaccaaggaagtcacggcc
gttgaggcaagcaagtacgaaaatccaggcttcgggcttagaccagattccttcggtcgg
ttcggccgtttcgggggcaagtacgtgccggagacccttatgtacgccctcactgagctc
gaggaggcgttctgggcactctccaaagacgaggaattccagagagagttagaaggaatt
cttagggattatgttggacgagaaagcccactttactttgcagagcggctgacagaacat
tacaggcgttctgatgggcaaggccctcatatttatctaaagagagaagatcttaatcat
acaggtgctcataagatcaataatgctgttgcacaagctttacttgccaaaaggttggga
aagaagcgcatcatagcggagacaggagctggtcaacatggggttgctacagctactgtc
tgtgctagatttggcttggaatgtattatttatatgggtgcccaggatatggagaggcaa
gccctaaatgtatttcgaatgaagcttcttggagctgaggtaagagctgtccattctgga
actgccacactaaaggatgccacttcagaagccatacgtgactgggtgaccaatgttgag
acaactcattacattttagggtctgtagcaggtccacatccttatccaatgatggttagg
gaattccatgcagtaattggcaaagagacaagaaagcaagctttagagaagtggggtggg
aagccagatgttcttgttgcatgtgttggtggaggttcaaatgccatggggctcttccat
gaatttgttgatgatagagatgtgagattagtaggtgtagaggctgctggctttggatta
gacagcggtaaacatgcagcaacattaacgaagggagaagtaggggttcttcatggtgcc
atgagttatttgctacaggatgatgatggccaaataattgagcctcattctataagtgct
gggttggactaccctggagttggtcccgagcacagctatttgaaggatattggacgagct
gaatactttagtgtcacagataaacaggctttggaagctttcaagcaactgtcacggctg
gagggtatcatccctgctcttgaaacttctcatgcgcttgcatacttggaagatctctgt
ccaactttgccagatggctcaaaggtggttgtcaattgcagtggcaggggcgataaggat
gtccaaactgctataaagcatcttcacctgtaa
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